Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 AL139385.1-201ENST00000611744 3272 ntBASIC14.38□□□□□ -0.11
TUBA1AQ71U36 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 HAUS4P1-201ENST00000406739 1145 ntBASIC14.38□□□□□ -0.11
TUBA1AQ71U36 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 SLC25A39P2-201ENST00000537614 270 ntBASIC14.38□□□□□ -0.11
TUBA1AQ71U36 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 LINC01225-203ENST00000563550 1244 ntBASIC14.38□□□□□ -0.11
TUBA1AQ71U36 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 AC008267.7-201ENST00000624570 1194 ntBASIC14.38□□□□□ -0.11
TUBA1AQ71U36 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TUBA1AQ71U36 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 METTL21AP1-201ENST00000438852 635 ntBASIC14.37□□□□□ -0.11
TUBA1AQ71U36 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 AC023141.5-201ENST00000458585 616 ntBASIC14.37□□□□□ -0.11
TUBA1AQ71U36 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 AP000842.3-202ENST00000569238 1080 ntBASIC14.37□□□□□ -0.11
TUBA1AQ71U36 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.37□□□□□ -0.11
TUBA1AQ71U36 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 AC140479.7-201ENST00000636301 2332 ntBASIC14.37□□□□□ -0.11
TUBA1AQ71U36 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 REXO1L2P-201ENST00000425429 2069 ntBASIC14.37□□□□□ -0.11
TUBA1AQ71U36 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TUBA1AQ71U36 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms