Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 LINC00528-201ENST00000600723 2160 ntBASIC15.1■□□□□ 0.01
SGO1Q5FBB7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 AC069262.1-201ENST00000539058 672 ntBASIC15.1■□□□□ 0.01
SGO1Q5FBB7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 MIR6069-201ENST00000620069 79 ntBASIC15.1■□□□□ 0.01
SGO1Q5FBB7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGO1Q5FBB7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 MIR1233-2-201ENST00000408138 82 ntBASIC15.09■□□□□ 0.01
SGO1Q5FBB7 MIR1233-1-201ENST00000408722 82 ntBASIC15.09■□□□□ 0.01
SGO1Q5FBB7 AL080243.2-201ENST00000418783 582 ntBASIC15.09■□□□□ 0.01
SGO1Q5FBB7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 AC004449.1-201ENST00000564240 433 ntBASIC15.09■□□□□ 0.01
SGO1Q5FBB7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 AL691403.2-201ENST00000618460 490 ntBASIC15.09■□□□□ 0.01
SGO1Q5FBB7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 Z92544.3-201ENST00000624747 417 ntBASIC15.09■□□□□ 0.01
SGO1Q5FBB7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGO1Q5FBB7 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms