Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 RPL37AP1-201ENST00000412502 279 ntBASIC14.91□□□□□ -0.02
RFTN2Q52LD8 AC211486.1-202ENST00000416371 468 ntBASIC14.91□□□□□ -0.02
RFTN2Q52LD8 BX842568.4-201ENST00000421222 227 ntBASIC14.91□□□□□ -0.02
RFTN2Q52LD8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 AC211476.1-201ENST00000503899 468 ntBASIC14.91□□□□□ -0.02
RFTN2Q52LD8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 SLED1-202ENST00000512051 380 ntBASIC14.91□□□□□ -0.02
RFTN2Q52LD8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 AC015910.1-201ENST00000579400 975 ntBASIC14.91□□□□□ -0.02
RFTN2Q52LD8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 AC025048.3-201ENST00000590609 569 ntBASIC14.91□□□□□ -0.02
RFTN2Q52LD8 AC005702.4-201ENST00000618393 416 ntBASIC14.91□□□□□ -0.02
RFTN2Q52LD8 AL033527.5-202ENST00000641632 1098 ntBASIC14.91□□□□□ -0.02
RFTN2Q52LD8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 CETN4P-206ENST00000642099 2168 ntBASIC14.91□□□□□ -0.02
RFTN2Q52LD8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 REXO1L2P-201ENST00000425429 2069 ntBASIC14.91□□□□□ -0.02
RFTN2Q52LD8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.91□□□□□ -0.02
RFTN2Q52LD8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.9□□□□□ -0.02
RFTN2Q52LD8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 GHSR-202ENST00000427970 912 ntBASIC14.9□□□□□ -0.02
RFTN2Q52LD8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 AL512356.2-201ENST00000546955 174 ntBASIC14.9□□□□□ -0.02
RFTN2Q52LD8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 LINC00628-201ENST00000628516 1289 ntBASIC14.9□□□□□ -0.02
RFTN2Q52LD8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 AF228730.6-201ENST00000641497 218 ntBASIC14.9□□□□□ -0.02
RFTN2Q52LD8 AC084121.3-201ENST00000641716 218 ntBASIC14.9□□□□□ -0.02
RFTN2Q52LD8 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 AC007191.1-201ENST00000623179 2995 ntBASIC14.9□□□□□ -0.02
RFTN2Q52LD8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
RFTN2Q52LD8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFTN2Q52LD8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RFTN2Q52LD8 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFTN2Q52LD8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RFTN2Q52LD8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFTN2Q52LD8 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RFTN2Q52LD8 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RFTN2Q52LD8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
RFTN2Q52LD8 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.89□□□□□ -0.03
RFTN2Q52LD8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFTN2Q52LD8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFTN2Q52LD8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFTN2Q52LD8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.89□□□□□ -0.03
RFTN2Q52LD8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms