Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL16A1Q07092 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL16A1Q07092 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
COL16A1Q07092 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
COL16A1Q07092 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL16A1Q07092 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL16A1Q07092 SNX15-201ENST00000352068 771 ntTSL 5 BASIC20.09■□□□□ 0.81
COL16A1Q07092 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
COL16A1Q07092 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL16A1Q07092 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC20.09■□□□□ 0.81
COL16A1Q07092 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC20.09■□□□□ 0.81
COL16A1Q07092 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL16A1Q07092 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC20.09■□□□□ 0.81
COL16A1Q07092 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL16A1Q07092 MIR6746-201ENST00000620971 63 ntBASIC20.09■□□□□ 0.81
COL16A1Q07092 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL16A1Q07092 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL16A1Q07092 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL16A1Q07092 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.09■□□□□ 0.81
COL16A1Q07092 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
COL16A1Q07092 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL16A1Q07092 AC003102.2-201ENST00000589195 1469 ntBASIC20.09■□□□□ 0.81
COL16A1Q07092 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL16A1Q07092 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL16A1Q07092 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC20.09■□□□□ 0.81
COL16A1Q07092 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL16A1Q07092 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL16A1Q07092 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL16A1Q07092 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL16A1Q07092 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.09■□□□□ 0.81
COL16A1Q07092 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL16A1Q07092 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC20.09■□□□□ 0.81
COL16A1Q07092 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC20.09■□□□□ 0.81
COL16A1Q07092 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC20.09■□□□□ 0.81
COL16A1Q07092 HNRNPA1P42-201ENST00000458678 957 ntBASIC20.09■□□□□ 0.81
COL16A1Q07092 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC20.09■□□□□ 0.81
COL16A1Q07092 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC20.09■□□□□ 0.81
COL16A1Q07092 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC20.09■□□□□ 0.81
COL16A1Q07092 TREHP1-201ENST00000531328 465 ntBASIC20.09■□□□□ 0.81
COL16A1Q07092 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL16A1Q07092 CYP4F36P-201ENST00000589193 186 ntBASIC20.09■□□□□ 0.81
COL16A1Q07092 AC090510.3-201ENST00000615831 821 ntBASIC20.09■□□□□ 0.81
COL16A1Q07092 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC20.09■□□□□ 0.81
COL16A1Q07092 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL16A1Q07092 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL16A1Q07092 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL16A1Q07092 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
COL16A1Q07092 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.08■□□□□ 0.81
COL16A1Q07092 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC20.08■□□□□ 0.81
COL16A1Q07092 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL16A1Q07092 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL16A1Q07092 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL16A1Q07092 REXO1L4P-201ENST00000605109 1937 ntBASIC20.08■□□□□ 0.81
COL16A1Q07092 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC20.08■□□□□ 0.8
COL16A1Q07092 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC20.08■□□□□ 0.8
COL16A1Q07092 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
COL16A1Q07092 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL16A1Q07092 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC20.08■□□□□ 0.8
COL16A1Q07092 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC20.08■□□□□ 0.8
COL16A1Q07092 CELP-201ENST00000411440 1249 ntTSL 5 BASIC20.08■□□□□ 0.8
COL16A1Q07092 AL929302.1-201ENST00000426556 871 ntBASIC20.08■□□□□ 0.8
COL16A1Q07092 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC20.08■□□□□ 0.8
COL16A1Q07092 RGS5-216ENST00000449680 788 ntTSL 3 BASIC20.08■□□□□ 0.8
COL16A1Q07092 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC20.08■□□□□ 0.8
COL16A1Q07092 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC20.08■□□□□ 0.8
COL16A1Q07092 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC20.08■□□□□ 0.8
COL16A1Q07092 CR392039.1-201ENST00000623217 204 ntBASIC20.08■□□□□ 0.8
COL16A1Q07092 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL16A1Q07092 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL16A1Q07092 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL16A1Q07092 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.8
COL16A1Q07092 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL16A1Q07092 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.07■□□□□ 0.8
COL16A1Q07092 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL16A1Q07092 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL16A1Q07092 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
COL16A1Q07092 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
COL16A1Q07092 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.07■□□□□ 0.8
COL16A1Q07092 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
COL16A1Q07092 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC20.07■□□□□ 0.8
COL16A1Q07092 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL16A1Q07092 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.07■□□□□ 0.8
COL16A1Q07092 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL16A1Q07092 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL16A1Q07092 HLA-DPA2-205ENST00000433582 733 ntBASIC20.07■□□□□ 0.8
COL16A1Q07092 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC20.07■□□□□ 0.8
COL16A1Q07092 CHCHD2P2-201ENST00000503744 321 ntBASIC20.07■□□□□ 0.8
COL16A1Q07092 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL16A1Q07092 HERC2P11-201ENST00000562845 725 ntBASIC20.07■□□□□ 0.8
COL16A1Q07092 AC100756.2-201ENST00000569537 736 ntBASIC20.07■□□□□ 0.8
COL16A1Q07092 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL16A1Q07092 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL16A1Q07092 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC20.07■□□□□ 0.8
COL16A1Q07092 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
COL16A1Q07092 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC20.07■□□□□ 0.8
COL16A1Q07092 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.07■□□□□ 0.8
COL16A1Q07092 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL16A1Q07092 AL137783.1-201ENST00000623494 1896 ntBASIC20.07■□□□□ 0.8
COL16A1Q07092 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL16A1Q07092 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms