Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IRX4P78413 MIR4259-201ENST00000584466 101 ntBASIC16.19■□□□□ 0.18
IRX4P78413 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.19■□□□□ 0.18
IRX4P78413 AL512343.1-201ENST00000605837 169 ntBASIC16.19■□□□□ 0.18
IRX4P78413 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.19■□□□□ 0.18
IRX4P78413 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
IRX4P78413 MYO15B-237ENST00000642007 4893 ntBASIC16.19■□□□□ 0.18
IRX4P78413 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
IRX4P78413 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IRX4P78413 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX4P78413 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IRX4P78413 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX4P78413 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IRX4P78413 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX4P78413 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
IRX4P78413 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX4P78413 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX4P78413 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
IRX4P78413 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX4P78413 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX4P78413 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
IRX4P78413 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.18■□□□□ 0.18
IRX4P78413 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX4P78413 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.18■□□□□ 0.18
IRX4P78413 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
IRX4P78413 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX4P78413 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX4P78413 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX4P78413 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.18■□□□□ 0.18
IRX4P78413 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX4P78413 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
IRX4P78413 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
IRX4P78413 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
IRX4P78413 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.18■□□□□ 0.18
IRX4P78413 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.18■□□□□ 0.18
IRX4P78413 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.18■□□□□ 0.18
IRX4P78413 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX4P78413 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX4P78413 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
IRX4P78413 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.18■□□□□ 0.18
IRX4P78413 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX4P78413 U82695.1-201ENST00000635752 1889 ntBASIC16.18■□□□□ 0.18
IRX4P78413 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
IRX4P78413 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IRX4P78413 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
IRX4P78413 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX4P78413 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX4P78413 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.18■□□□□ 0.18
IRX4P78413 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.18■□□□□ 0.18
IRX4P78413 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX4P78413 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.17■□□□□ 0.18
IRX4P78413 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
IRX4P78413 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IRX4P78413 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX4P78413 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
IRX4P78413 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX4P78413 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
IRX4P78413 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.17■□□□□ 0.18
IRX4P78413 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX4P78413 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX4P78413 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IRX4P78413 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.17■□□□□ 0.18
IRX4P78413 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX4P78413 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX4P78413 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.17■□□□□ 0.18
IRX4P78413 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IRX4P78413 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
IRX4P78413 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.17■□□□□ 0.18
IRX4P78413 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IRX4P78413 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.17■□□□□ 0.18
IRX4P78413 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.17■□□□□ 0.18
IRX4P78413 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.17■□□□□ 0.18
IRX4P78413 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.17■□□□□ 0.18
IRX4P78413 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.17■□□□□ 0.18
IRX4P78413 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.17■□□□□ 0.18
IRX4P78413 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
IRX4P78413 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.17■□□□□ 0.18
IRX4P78413 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.17■□□□□ 0.18
IRX4P78413 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.17■□□□□ 0.18
IRX4P78413 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.17■□□□□ 0.18
IRX4P78413 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.17■□□□□ 0.18
IRX4P78413 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms