Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
VBP1P61758 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.93□□□□□ -0.18
VBP1P61758 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VBP1P61758 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.92□□□□□ -0.18
VBP1P61758 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VBP1P61758 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.92□□□□□ -0.18
VBP1P61758 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
VBP1P61758 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.92□□□□□ -0.18
VBP1P61758 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.92□□□□□ -0.18
VBP1P61758 AC019294.4-201ENST00000561777 2905 ntBASIC13.92□□□□□ -0.18
VBP1P61758 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.92□□□□□ -0.18
VBP1P61758 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.92□□□□□ -0.18
VBP1P61758 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
VBP1P61758 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.92□□□□□ -0.18
VBP1P61758 ELK2BP-201ENST00000415014 1224 ntBASIC13.92□□□□□ -0.18
VBP1P61758 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VBP1P61758 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.92□□□□□ -0.18
VBP1P61758 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.92□□□□□ -0.18
VBP1P61758 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.92□□□□□ -0.18
VBP1P61758 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VBP1P61758 AC005363.2-201ENST00000618631 242 ntBASIC13.92□□□□□ -0.18
VBP1P61758 AL139288.1-201ENST00000623748 933 ntBASIC13.92□□□□□ -0.18
VBP1P61758 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
VBP1P61758 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.92□□□□□ -0.18
VBP1P61758 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
VBP1P61758 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
VBP1P61758 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
VBP1P61758 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
VBP1P61758 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
VBP1P61758 AC018442.1-201ENST00000421439 2061 ntBASIC13.92□□□□□ -0.18
VBP1P61758 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
VBP1P61758 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.92□□□□□ -0.18
VBP1P61758 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
VBP1P61758 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.92□□□□□ -0.18
VBP1P61758 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
VBP1P61758 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.91□□□□□ -0.18
VBP1P61758 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.91□□□□□ -0.18
VBP1P61758 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VBP1P61758 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VBP1P61758 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
VBP1P61758 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.91□□□□□ -0.18
VBP1P61758 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VBP1P61758 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.91□□□□□ -0.18
VBP1P61758 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.91□□□□□ -0.18
VBP1P61758 AL731571.1-201ENST00000617058 5428 ntBASIC13.91□□□□□ -0.18
VBP1P61758 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.91□□□□□ -0.18
VBP1P61758 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.91□□□□□ -0.18
VBP1P61758 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 PMS2P4-201ENST00000412466 1052 ntBASIC13.91□□□□□ -0.18
VBP1P61758 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 AC243562.2-201ENST00000561247 970 ntBASIC13.91□□□□□ -0.18
VBP1P61758 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.91□□□□□ -0.18
VBP1P61758 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.91□□□□□ -0.18
VBP1P61758 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VBP1P61758 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VBP1P61758 MIR3909-201ENST00000579518 119 ntBASIC13.91□□□□□ -0.18
VBP1P61758 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.91□□□□□ -0.18
VBP1P61758 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.91□□□□□ -0.18
VBP1P61758 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
VBP1P61758 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.91□□□□□ -0.18
VBP1P61758 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 NUTM2HP-201ENST00000442076 2498 ntBASIC13.91□□□□□ -0.18
VBP1P61758 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms