Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
AP3S2P59780 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.34□□□□□ -0.27
AP3S2P59780 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.34□□□□□ -0.27
AP3S2P59780 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.34□□□□□ -0.27
AP3S2P59780 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
AP3S2P59780 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.34□□□□□ -0.27
AP3S2P59780 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.34□□□□□ -0.27
AP3S2P59780 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.34□□□□□ -0.27
AP3S2P59780 AC133561.5-201ENST00000635547 218 ntBASIC13.34□□□□□ -0.27
AP3S2P59780 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.34□□□□□ -0.27
AP3S2P59780 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
AP3S2P59780 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.34□□□□□ -0.27
AP3S2P59780 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
AP3S2P59780 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
AP3S2P59780 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
AP3S2P59780 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
AP3S2P59780 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 AC097359.2-201ENST00000604992 2389 ntBASIC13.34□□□□□ -0.27
AP3S2P59780 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.34□□□□□ -0.27
AP3S2P59780 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
AP3S2P59780 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
AP3S2P59780 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
AP3S2P59780 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
AP3S2P59780 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.33□□□□□ -0.27
AP3S2P59780 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
AP3S2P59780 AC107918.4-201ENST00000641966 3141 ntBASIC13.33□□□□□ -0.27
AP3S2P59780 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
AP3S2P59780 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.33□□□□□ -0.28
AP3S2P59780 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
AP3S2P59780 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.33□□□□□ -0.28
AP3S2P59780 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
AP3S2P59780 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.33□□□□□ -0.28
AP3S2P59780 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
AP3S2P59780 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.33□□□□□ -0.28
AP3S2P59780 AP002383.4-201ENST00000442518 975 ntBASIC13.33□□□□□ -0.28
AP3S2P59780 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.33□□□□□ -0.28
AP3S2P59780 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.33□□□□□ -0.28
AP3S2P59780 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.33□□□□□ -0.28
AP3S2P59780 MTDHP3-201ENST00000594186 672 ntBASIC13.33□□□□□ -0.28
AP3S2P59780 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.33□□□□□ -0.28
AP3S2P59780 AL121956.5-201ENST00000625261 221 ntBASIC13.33□□□□□ -0.28
AP3S2P59780 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.33□□□□□ -0.28
AP3S2P59780 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
AP3S2P59780 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.33□□□□□ -0.28
AP3S2P59780 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.33□□□□□ -0.28
AP3S2P59780 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
AP3S2P59780 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
AP3S2P59780 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.33□□□□□ -0.28
AP3S2P59780 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 MST1P2-201ENST00000457982 2291 ntBASIC13.33□□□□□ -0.28
AP3S2P59780 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.33□□□□□ -0.28
AP3S2P59780 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.33□□□□□ -0.28
AP3S2P59780 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.33□□□□□ -0.28
AP3S2P59780 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AP3S2P59780 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.33□□□□□ -0.28
AP3S2P59780 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S2P59780 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.32□□□□□ -0.28
AP3S2P59780 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.32□□□□□ -0.28
AP3S2P59780 CICP17-201ENST00000418553 2377 ntBASIC13.32□□□□□ -0.28
AP3S2P59780 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S2P59780 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S2P59780 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.32□□□□□ -0.28
AP3S2P59780 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S2P59780 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.32□□□□□ -0.28
AP3S2P59780 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S2P59780 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S2P59780 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S2P59780 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.32□□□□□ -0.28
AP3S2P59780 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
AP3S2P59780 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S2P59780 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S2P59780 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
AP3S2P59780 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms