Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A2P43354 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.18□□□□□ -0.14
NR4A2P43354 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A2P43354 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A2P43354 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A2P43354 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A2P43354 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.18□□□□□ -0.14
NR4A2P43354 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A2P43354 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A2P43354 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A2P43354 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NR4A2P43354 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NR4A2P43354 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A2P43354 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A2P43354 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NR4A2P43354 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 AL592424.1-201ENST00000563624 1536 ntBASIC14.17□□□□□ -0.14
NR4A2P43354 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
NR4A2P43354 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NR4A2P43354 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A2P43354 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A2P43354 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.17□□□□□ -0.14
NR4A2P43354 TFAMP1-201ENST00000412727 736 ntBASIC14.17□□□□□ -0.14
NR4A2P43354 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A2P43354 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.17□□□□□ -0.14
NR4A2P43354 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 AL592309.1-201ENST00000443127 649 ntBASIC14.17□□□□□ -0.14
NR4A2P43354 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A2P43354 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.17□□□□□ -0.14
NR4A2P43354 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A2P43354 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NR4A2P43354 SPCS2P1-201ENST00000561636 679 ntBASIC14.17□□□□□ -0.14
NR4A2P43354 AC093520.2-201ENST00000561830 333 ntBASIC14.17□□□□□ -0.14
NR4A2P43354 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.17□□□□□ -0.14
NR4A2P43354 MPDU1-223ENST00000582151 728 ntBASIC14.17□□□□□ -0.14
NR4A2P43354 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.17□□□□□ -0.14
NR4A2P43354 AC020765.3-201ENST00000613051 740 ntBASIC14.17□□□□□ -0.14
NR4A2P43354 AL161645.1-201ENST00000622716 1255 ntBASIC14.17□□□□□ -0.14
NR4A2P43354 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NR4A2P43354 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.17□□□□□ -0.14
NR4A2P43354 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A2P43354 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 OR2I1P-209ENST00000641730 5365 ntBASIC14.17□□□□□ -0.14
NR4A2P43354 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A2P43354 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A2P43354 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A2P43354 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A2P43354 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A2P43354 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A2P43354 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.16□□□□□ -0.14
NR4A2P43354 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A2P43354 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
NR4A2P43354 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A2P43354 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A2P43354 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A2P43354 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A2P43354 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
NR4A2P43354 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.16□□□□□ -0.14
NR4A2P43354 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.16□□□□□ -0.14
NR4A2P43354 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.16□□□□□ -0.14
NR4A2P43354 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A2P43354 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.16□□□□□ -0.14
NR4A2P43354 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.16□□□□□ -0.14
NR4A2P43354 AC079140.1-201ENST00000508039 487 ntBASIC14.16□□□□□ -0.14
NR4A2P43354 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.16□□□□□ -0.14
NR4A2P43354 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.16□□□□□ -0.14
NR4A2P43354 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A2P43354 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A2P43354 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.16□□□□□ -0.14
NR4A2P43354 RARRES2P8-201ENST00000566335 367 ntBASIC14.16□□□□□ -0.14
NR4A2P43354 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.16□□□□□ -0.14
NR4A2P43354 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NR4A2P43354 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NR4A2P43354 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A2P43354 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
NR4A2P43354 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NR4A2P43354 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms