Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.58■□□□□ 0.41
CNGA1P29973 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNGA1P29973 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CNGA1P29973 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CNGA1P29973 KRT8P35-201ENST00000483942 1338 ntBASIC17.58■□□□□ 0.4
CNGA1P29973 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNGA1P29973 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CNGA1P29973 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNGA1P29973 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.58■□□□□ 0.4
CNGA1P29973 AC005077.2-201ENST00000449786 690 ntBASIC17.58■□□□□ 0.4
CNGA1P29973 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.58■□□□□ 0.4
CNGA1P29973 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.58■□□□□ 0.4
CNGA1P29973 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNGA1P29973 AC079328.1-201ENST00000560358 952 ntBASIC17.58■□□□□ 0.4
CNGA1P29973 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.58■□□□□ 0.4
CNGA1P29973 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.58■□□□□ 0.4
CNGA1P29973 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.58■□□□□ 0.4
CNGA1P29973 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.58■□□□□ 0.4
CNGA1P29973 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.58■□□□□ 0.4
CNGA1P29973 AC132938.4-201ENST00000623835 848 ntBASIC17.58■□□□□ 0.4
CNGA1P29973 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNGA1P29973 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNGA1P29973 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.58■□□□□ 0.4
CNGA1P29973 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNGA1P29973 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNGA1P29973 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.58■□□□□ 0.4
CNGA1P29973 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNGA1P29973 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNGA1P29973 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.58■□□□□ 0.4
CNGA1P29973 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.58■□□□□ 0.4
CNGA1P29973 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNGA1P29973 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNGA1P29973 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CNGA1P29973 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.58■□□□□ 0.4
CNGA1P29973 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNGA1P29973 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNGA1P29973 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.58■□□□□ 0.4
CNGA1P29973 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CNGA1P29973 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CNGA1P29973 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CNGA1P29973 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNGA1P29973 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CNGA1P29973 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNGA1P29973 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNGA1P29973 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNGA1P29973 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.57■□□□□ 0.4
CNGA1P29973 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNGA1P29973 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CNGA1P29973 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.57■□□□□ 0.4
CNGA1P29973 AC011477.6-201ENST00000604980 1927 ntBASIC17.57■□□□□ 0.4
CNGA1P29973 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNGA1P29973 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNGA1P29973 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNGA1P29973 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CNGA1P29973 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.57■□□□□ 0.4
CNGA1P29973 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.57■□□□□ 0.4
CNGA1P29973 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.57■□□□□ 0.4
CNGA1P29973 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.57■□□□□ 0.4
CNGA1P29973 RNA5SP486-201ENST00000515961 83 ntBASIC17.57■□□□□ 0.4
CNGA1P29973 SCARNA20.5-201ENST00000516991 142 ntBASIC17.57■□□□□ 0.4
CNGA1P29973 AP006547.1-201ENST00000563435 692 ntBASIC17.57■□□□□ 0.4
CNGA1P29973 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNGA1P29973 AC015910.1-201ENST00000579400 975 ntBASIC17.57■□□□□ 0.4
CNGA1P29973 AC020914.3-201ENST00000594712 304 ntBASIC17.57■□□□□ 0.4
CNGA1P29973 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
CNGA1P29973 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNGA1P29973 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNGA1P29973 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CNGA1P29973 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNGA1P29973 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNGA1P29973 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.57■□□□□ 0.4
CNGA1P29973 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.57■□□□□ 0.4
CNGA1P29973 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
CNGA1P29973 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNGA1P29973 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.57■□□□□ 0.4
CNGA1P29973 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.57■□□□□ 0.4
CNGA1P29973 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNGA1P29973 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.57■□□□□ 0.4
CNGA1P29973 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.57■□□□□ 0.4
CNGA1P29973 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CNGA1P29973 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.56■□□□□ 0.4
CNGA1P29973 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.56■□□□□ 0.4
CNGA1P29973 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.56■□□□□ 0.4
CNGA1P29973 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.56■□□□□ 0.4
CNGA1P29973 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.56■□□□□ 0.4
CNGA1P29973 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CNGA1P29973 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.56■□□□□ 0.4
CNGA1P29973 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.56■□□□□ 0.4
CNGA1P29973 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms