Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
CCL1P22362 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL1P22362 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CCL1P22362 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.29□□□□□ -0.28
CCL1P22362 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 KRT18P13-201ENST00000400056 1290 ntBASIC13.29□□□□□ -0.28
CCL1P22362 AC107890.1-201ENST00000422478 521 ntBASIC13.29□□□□□ -0.28
CCL1P22362 AC092580.3-201ENST00000430932 139 ntBASIC13.29□□□□□ -0.28
CCL1P22362 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCL1P22362 AC114501.2-201ENST00000439631 535 ntBASIC13.29□□□□□ -0.28
CCL1P22362 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 GAPDHP40-201ENST00000505218 1006 ntBASIC13.29□□□□□ -0.28
CCL1P22362 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCL1P22362 AC044860.1-202ENST00000559481 777 ntBASIC13.29□□□□□ -0.28
CCL1P22362 AC025678.2-201ENST00000562061 970 ntBASIC13.29□□□□□ -0.28
CCL1P22362 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL1P22362 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
CCL1P22362 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.29□□□□□ -0.28
CCL1P22362 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL1P22362 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCL1P22362 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.29□□□□□ -0.28
CCL1P22362 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CCL1P22362 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.29□□□□□ -0.28
CCL1P22362 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 LILRP1-201ENST00000444199 1370 ntBASIC13.29□□□□□ -0.28
CCL1P22362 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CCL1P22362 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL1P22362 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL1P22362 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
CCL1P22362 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL1P22362 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CCL1P22362 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL1P22362 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CCL1P22362 AC018442.1-201ENST00000421439 2061 ntBASIC13.28□□□□□ -0.28
CCL1P22362 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL1P22362 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL1P22362 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL1P22362 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCL1P22362 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL1P22362 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CCL1P22362 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL1P22362 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL1P22362 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.28□□□□□ -0.28
CCL1P22362 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL1P22362 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.28□□□□□ -0.28
CCL1P22362 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.28□□□□□ -0.28
CCL1P22362 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.28□□□□□ -0.28
CCL1P22362 AC067863.1-201ENST00000494933 530 ntBASIC13.28□□□□□ -0.28
CCL1P22362 AC027369.6-201ENST00000525520 931 ntBASIC13.28□□□□□ -0.28
CCL1P22362 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CCL1P22362 AL391069.4-201ENST00000609583 481 ntBASIC13.28□□□□□ -0.28
CCL1P22362 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CCL1P22362 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CCL1P22362 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL1P22362 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 AC067930.6-201ENST00000623257 4947 ntBASIC13.28□□□□□ -0.28
CCL1P22362 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCL1P22362 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL1P22362 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CCL1P22362 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL1P22362 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CCL1P22362 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL1P22362 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CCL1P22362 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CCL1P22362 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL1P22362 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms