Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RAB3BP20337 AC010507.1-201ENST00000633895 436 ntBASIC13.62□□□□□ -0.23
RAB3BP20337 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB3BP20337 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RAB3BP20337 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.62□□□□□ -0.23
RAB3BP20337 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RAB3BP20337 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.62□□□□□ -0.23
RAB3BP20337 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB3BP20337 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB3BP20337 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RAB3BP20337 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.62□□□□□ -0.23
RAB3BP20337 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB3BP20337 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB3BP20337 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB3BP20337 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.62□□□□□ -0.23
RAB3BP20337 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.62□□□□□ -0.23
RAB3BP20337 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB3BP20337 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB3BP20337 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB3BP20337 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB3BP20337 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB3BP20337 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.62□□□□□ -0.23
RAB3BP20337 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB3BP20337 AC084364.1-201ENST00000551967 1556 ntBASIC13.62□□□□□ -0.23
RAB3BP20337 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB3BP20337 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RAB3BP20337 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.62□□□□□ -0.23
RAB3BP20337 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RAB3BP20337 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB3BP20337 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RAB3BP20337 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB3BP20337 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB3BP20337 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB3BP20337 AC018712.1-201ENST00000455767 687 ntBASIC13.61□□□□□ -0.23
RAB3BP20337 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 HNRNPUP1-201ENST00000554987 333 ntBASIC13.61□□□□□ -0.23
RAB3BP20337 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RAB3BP20337 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
RAB3BP20337 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
RAB3BP20337 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 CYP4F24P-201ENST00000586049 1580 ntBASIC13.61□□□□□ -0.23
RAB3BP20337 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
RAB3BP20337 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB3BP20337 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RAB3BP20337 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB3BP20337 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB3BP20337 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB3BP20337 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB3BP20337 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
RAB3BP20337 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.6□□□□□ -0.23
RAB3BP20337 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB3BP20337 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB3BP20337 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RAB3BP20337 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
RAB3BP20337 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RAB3BP20337 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
RAB3BP20337 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
RAB3BP20337 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.6□□□□□ -0.23
RAB3BP20337 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
RAB3BP20337 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RAB3BP20337 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RAB3BP20337 EEF1DP4-201ENST00000446006 880 ntBASIC13.6□□□□□ -0.23
RAB3BP20337 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 HCG4B-203ENST00000450128 991 ntBASIC13.6□□□□□ -0.23
RAB3BP20337 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms