Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
NCLP19338 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
NCLP19338 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCLP19338 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NCLP19338 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCLP19338 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCLP19338 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.54■□□□□ 0.56
NCLP19338 ACTG1P14-201ENST00000446382 1122 ntBASIC18.54■□□□□ 0.56
NCLP19338 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.54■□□□□ 0.56
NCLP19338 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.54■□□□□ 0.56
NCLP19338 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.54■□□□□ 0.56
NCLP19338 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NCLP19338 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.54■□□□□ 0.56
NCLP19338 AC068137.2-201ENST00000605408 478 ntBASIC18.54■□□□□ 0.56
NCLP19338 AC091812.2-201ENST00000619081 385 ntBASIC18.54■□□□□ 0.56
NCLP19338 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.54■□□□□ 0.56
NCLP19338 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCLP19338 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.54■□□□□ 0.56
NCLP19338 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCLP19338 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
NCLP19338 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
NCLP19338 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCLP19338 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NCLP19338 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCLP19338 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
NCLP19338 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NCLP19338 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NCLP19338 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCLP19338 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCLP19338 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCLP19338 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCLP19338 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.53■□□□□ 0.56
NCLP19338 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.53■□□□□ 0.56
NCLP19338 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCLP19338 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCLP19338 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCLP19338 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCLP19338 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
NCLP19338 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCLP19338 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCLP19338 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NCLP19338 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCLP19338 PMS2P2-201ENST00000425039 1128 ntBASIC18.53■□□□□ 0.56
NCLP19338 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NCLP19338 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
NCLP19338 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NCLP19338 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.53■□□□□ 0.56
NCLP19338 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.53■□□□□ 0.56
NCLP19338 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.53■□□□□ 0.56
NCLP19338 SNHG9-202ENST00000564014 471 ntBASIC18.53■□□□□ 0.56
NCLP19338 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.53■□□□□ 0.56
NCLP19338 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NCLP19338 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NCLP19338 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NCLP19338 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NCLP19338 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC18.53■□□□□ 0.56
NCLP19338 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCLP19338 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
NCLP19338 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCLP19338 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCLP19338 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NCLP19338 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.52■□□□□ 0.56
NCLP19338 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.52■□□□□ 0.56
NCLP19338 AC013726.1-201ENST00000563747 2285 ntBASIC18.52■□□□□ 0.56
NCLP19338 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.52■□□□□ 0.56
NCLP19338 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NCLP19338 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.52■□□□□ 0.56
NCLP19338 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.52■□□□□ 0.56
NCLP19338 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC18.52■□□□□ 0.56
NCLP19338 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC18.52■□□□□ 0.56
NCLP19338 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.52■□□□□ 0.56
NCLP19338 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 AC140658.5-201ENST00000438532 169 ntBASIC18.52■□□□□ 0.56
NCLP19338 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.52■□□□□ 0.56
NCLP19338 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.52■□□□□ 0.56
NCLP19338 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
NCLP19338 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.52■□□□□ 0.56
NCLP19338 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
NCLP19338 AP002472.1-201ENST00000577490 586 ntBASIC18.52■□□□□ 0.56
NCLP19338 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.52■□□□□ 0.56
NCLP19338 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.52■□□□□ 0.56
NCLP19338 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC18.52■□□□□ 0.56
NCLP19338 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCLP19338 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms