Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYN1P17600 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SYN1P17600 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SYN1P17600 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SYN1P17600 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.59■□□□□ 0.25
SYN1P17600 RN7SL596P-201ENST00000582123 288 ntBASIC16.59■□□□□ 0.25
SYN1P17600 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.59■□□□□ 0.25
SYN1P17600 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.59■□□□□ 0.25
SYN1P17600 FKBP4P6-201ENST00000457486 1332 ntBASIC16.59■□□□□ 0.25
SYN1P17600 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYN1P17600 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYN1P17600 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYN1P17600 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYN1P17600 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.59■□□□□ 0.25
SYN1P17600 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SYN1P17600 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYN1P17600 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SYN1P17600 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.59■□□□□ 0.25
SYN1P17600 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SYN1P17600 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.59■□□□□ 0.25
SYN1P17600 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYN1P17600 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
SYN1P17600 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SYN1P17600 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.59■□□□□ 0.25
SYN1P17600 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYN1P17600 ALOX12P2-203ENST00000570921 1945 ntBASIC16.58■□□□□ 0.25
SYN1P17600 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.58■□□□□ 0.25
SYN1P17600 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SYN1P17600 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SYN1P17600 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
SYN1P17600 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SYN1P17600 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.58■□□□□ 0.25
SYN1P17600 AC022211.2-201ENST00000585075 2527 ntBASIC16.58■□□□□ 0.25
SYN1P17600 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SYN1P17600 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
SYN1P17600 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SYN1P17600 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SYN1P17600 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SYN1P17600 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYN1P17600 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYN1P17600 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC16.58■□□□□ 0.24
SYN1P17600 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SYN1P17600 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYN1P17600 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYN1P17600 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SYN1P17600 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.58■□□□□ 0.24
SYN1P17600 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.58■□□□□ 0.24
SYN1P17600 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.58■□□□□ 0.24
SYN1P17600 AC008723.1-201ENST00000506922 207 ntBASIC16.58■□□□□ 0.24
SYN1P17600 SAMD11P1-201ENST00000571429 661 ntBASIC16.58■□□□□ 0.24
SYN1P17600 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYN1P17600 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.58■□□□□ 0.24
SYN1P17600 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.58■□□□□ 0.24
SYN1P17600 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SYN1P17600 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.58■□□□□ 0.24
SYN1P17600 FO393412.1-201ENST00000619841 382 ntBASIC16.58■□□□□ 0.24
SYN1P17600 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYN1P17600 FAM90A2P-201ENST00000511144 1395 ntBASIC16.58■□□□□ 0.24
SYN1P17600 FAM90A25P-201ENST00000528404 1395 ntBASIC16.58■□□□□ 0.24
SYN1P17600 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC16.58■□□□□ 0.24
SYN1P17600 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
SYN1P17600 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYN1P17600 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SYN1P17600 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.58■□□□□ 0.24
SYN1P17600 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SYN1P17600 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.58■□□□□ 0.24
SYN1P17600 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SYN1P17600 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SYN1P17600 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SYN1P17600 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SYN1P17600 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYN1P17600 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYN1P17600 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYN1P17600 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.57■□□□□ 0.24
SYN1P17600 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SYN1P17600 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.57■□□□□ 0.24
SYN1P17600 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SYN1P17600 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SYN1P17600 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYN1P17600 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.57■□□□□ 0.24
SYN1P17600 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
SYN1P17600 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYN1P17600 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYN1P17600 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYN1P17600 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.57■□□□□ 0.24
SYN1P17600 AC239868.1-201ENST00000369385 493 ntBASIC16.57■□□□□ 0.24
SYN1P17600 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SYN1P17600 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.57■□□□□ 0.24
SYN1P17600 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.57■□□□□ 0.24
SYN1P17600 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.57■□□□□ 0.24
SYN1P17600 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.57■□□□□ 0.24
SYN1P17600 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.57■□□□□ 0.24
SYN1P17600 HLA-J-204ENST00000495278 958 ntBASIC16.57■□□□□ 0.24
SYN1P17600 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.57■□□□□ 0.24
SYN1P17600 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.57■□□□□ 0.24
SYN1P17600 MIR3677-201ENST00000578964 60 ntBASIC16.57■□□□□ 0.24
SYN1P17600 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.57■□□□□ 0.24
SYN1P17600 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYN1P17600 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYN1P17600 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms