Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC26.3■■□□□ 1.8
TOP2AP11388 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TOP2AP11388 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC26.3■■□□□ 1.8
TOP2AP11388 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TOP2AP11388 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
TOP2AP11388 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC26.3■■□□□ 1.8
TOP2AP11388 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC26.3■■□□□ 1.8
TOP2AP11388 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC26.3■■□□□ 1.8
TOP2AP11388 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC26.3■■□□□ 1.8
TOP2AP11388 FOS-204ENST00000554617 796 ntTSL 2 BASIC26.3■■□□□ 1.8
TOP2AP11388 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC26.3■■□□□ 1.8
TOP2AP11388 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC26.3■■□□□ 1.8
TOP2AP11388 AC087045.2-201ENST00000606279 1003 ntBASIC26.3■■□□□ 1.8
TOP2AP11388 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TOP2AP11388 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC26.3■■□□□ 1.8
TOP2AP11388 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TOP2AP11388 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
TOP2AP11388 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TOP2AP11388 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC26.3■■□□□ 1.8
TOP2AP11388 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TOP2AP11388 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TOP2AP11388 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TOP2AP11388 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TOP2AP11388 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TOP2AP11388 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TOP2AP11388 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TOP2AP11388 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TOP2AP11388 NCR3-202ENST00000376071 541 ntTSL 5 BASIC26.29■■□□□ 1.8
TOP2AP11388 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
TOP2AP11388 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TOP2AP11388 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TOP2AP11388 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC26.29■■□□□ 1.8
TOP2AP11388 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC26.29■■□□□ 1.8
TOP2AP11388 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TOP2AP11388 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC26.29■■□□□ 1.8
TOP2AP11388 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC26.29■■□□□ 1.8
TOP2AP11388 AC135983.4-201ENST00000564116 1262 ntBASIC26.29■■□□□ 1.8
TOP2AP11388 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC26.29■■□□□ 1.8
TOP2AP11388 AC009884.2-201ENST00000603110 324 ntBASIC26.29■■□□□ 1.8
TOP2AP11388 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TOP2AP11388 CMC2-224ENST00000630396 481 ntTSL 5 BASIC26.29■■□□□ 1.8
TOP2AP11388 FRMPD2B-201ENST00000431305 1347 ntBASIC26.29■■□□□ 1.8
TOP2AP11388 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TOP2AP11388 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC26.29■■□□□ 1.8
TOP2AP11388 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC26.29■■□□□ 1.8
TOP2AP11388 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC26.29■■□□□ 1.8
TOP2AP11388 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC26.29■■□□□ 1.8
TOP2AP11388 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC26.29■■□□□ 1.8
TOP2AP11388 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TOP2AP11388 CCNC-217ENST00000523985 958 ntTSL 2 BASIC26.29■■□□□ 1.8
TOP2AP11388 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
TOP2AP11388 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC26.29■■□□□ 1.8
TOP2AP11388 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC26.29■■□□□ 1.8
TOP2AP11388 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC26.29■■□□□ 1.8
TOP2AP11388 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC26.29■■□□□ 1.8
TOP2AP11388 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TOP2AP11388 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TOP2AP11388 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TOP2AP11388 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TOP2AP11388 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TOP2AP11388 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TOP2AP11388 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC26.28■■□□□ 1.8
TOP2AP11388 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TOP2AP11388 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TOP2AP11388 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TOP2AP11388 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC26.28■■□□□ 1.8
TOP2AP11388 OR2R1P-201ENST00000441404 914 ntBASIC26.28■■□□□ 1.8
TOP2AP11388 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
TOP2AP11388 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC26.28■■□□□ 1.8
TOP2AP11388 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TOP2AP11388 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TOP2AP11388 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TOP2AP11388 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC26.28■■□□□ 1.8
TOP2AP11388 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TOP2AP11388 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TOP2AP11388 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC26.28■■□□□ 1.8
TOP2AP11388 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TOP2AP11388 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TOP2AP11388 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TOP2AP11388 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TOP2AP11388 BANP-204ENST00000393208 2283 ntTSL 2 BASIC26.27■■□□□ 1.8
TOP2AP11388 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
TOP2AP11388 AC144522.1-201ENST00000625111 1658 ntBASIC26.27■■□□□ 1.8
TOP2AP11388 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
TOP2AP11388 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TOP2AP11388 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TOP2AP11388 MIR557-201ENST00000385239 98 ntBASIC26.27■■□□□ 1.8
TOP2AP11388 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC26.27■■□□□ 1.8
TOP2AP11388 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC26.27■■□□□ 1.8
TOP2AP11388 TMCO5B-205ENST00000530020 894 ntBASIC26.27■■□□□ 1.8
TOP2AP11388 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC26.27■■□□□ 1.8
TOP2AP11388 AC005632.3-201ENST00000605544 308 ntBASIC26.27■■□□□ 1.8
TOP2AP11388 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TOP2AP11388 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC26.27■■□□□ 1.8
TOP2AP11388 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
TOP2AP11388 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TOP2AP11388 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC26.27■■□□□ 1.8
TOP2AP11388 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
TOP2AP11388 AC074138.1-201ENST00000611182 1303 ntBASIC26.27■■□□□ 1.8
TOP2AP11388 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms