Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
CD28P10747 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.12□□□□□ -0.47
CD28P10747 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.12□□□□□ -0.47
CD28P10747 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CD28P10747 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.12□□□□□ -0.47
CD28P10747 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CD28P10747 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 AL133267.1-201ENST00000398220 340 ntBASIC12.12□□□□□ -0.47
CD28P10747 BRWD1P1-201ENST00000401091 371 ntBASIC12.12□□□□□ -0.47
CD28P10747 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.12□□□□□ -0.47
CD28P10747 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.12□□□□□ -0.47
CD28P10747 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.12□□□□□ -0.47
CD28P10747 FAM21FP-201ENST00000426241 1131 ntBASIC12.12□□□□□ -0.47
CD28P10747 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.12□□□□□ -0.47
CD28P10747 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.12□□□□□ -0.47
CD28P10747 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.12□□□□□ -0.47
CD28P10747 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.12□□□□□ -0.47
CD28P10747 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.12□□□□□ -0.47
CD28P10747 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.12□□□□□ -0.47
CD28P10747 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.12□□□□□ -0.47
CD28P10747 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.12□□□□□ -0.47
CD28P10747 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.12□□□□□ -0.47
CD28P10747 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.12□□□□□ -0.47
CD28P10747 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.12□□□□□ -0.47
CD28P10747 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 MIR4525-201ENST00000580000 75 ntBASIC12.12□□□□□ -0.47
CD28P10747 MIR4313-201ENST00000580760 101 ntBASIC12.12□□□□□ -0.47
CD28P10747 AC093813.1-201ENST00000605066 256 ntBASIC12.12□□□□□ -0.47
CD28P10747 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.12□□□□□ -0.47
CD28P10747 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CD28P10747 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
CD28P10747 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CD28P10747 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
CD28P10747 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CD28P10747 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.12□□□□□ -0.47
CD28P10747 AC011270.2-201ENST00000624293 2550 ntBASIC12.12□□□□□ -0.47
CD28P10747 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CD28P10747 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD28P10747 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.11□□□□□ -0.47
CD28P10747 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.11□□□□□ -0.47
CD28P10747 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CD28P10747 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.11□□□□□ -0.47
CD28P10747 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
CD28P10747 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.11□□□□□ -0.47
CD28P10747 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
CD28P10747 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD28P10747 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.11□□□□□ -0.47
CD28P10747 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.11□□□□□ -0.47
CD28P10747 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.11□□□□□ -0.47
CD28P10747 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
CD28P10747 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms