Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.95■□□□□ 0.3
CLTAP09496 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.95■□□□□ 0.3
CLTAP09496 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLTAP09496 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.95■□□□□ 0.3
CLTAP09496 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CLTAP09496 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.95■□□□□ 0.3
CLTAP09496 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLTAP09496 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLTAP09496 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLTAP09496 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CLTAP09496 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLTAP09496 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLTAP09496 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLTAP09496 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLTAP09496 AC063926.2-201ENST00000623766 1308 ntBASIC16.95■□□□□ 0.3
CLTAP09496 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLTAP09496 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.94■□□□□ 0.3
CLTAP09496 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLTAP09496 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLTAP09496 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLTAP09496 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLTAP09496 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLTAP09496 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLTAP09496 AC009090.5-201ENST00000624886 2285 ntBASIC16.94■□□□□ 0.3
CLTAP09496 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
CLTAP09496 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLTAP09496 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLTAP09496 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLTAP09496 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLTAP09496 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLTAP09496 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLTAP09496 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.94■□□□□ 0.3
CLTAP09496 AC134915.1-201ENST00000426461 574 ntBASIC16.94■□□□□ 0.3
CLTAP09496 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.94■□□□□ 0.3
CLTAP09496 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.94■□□□□ 0.3
CLTAP09496 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.94■□□□□ 0.3
CLTAP09496 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.94■□□□□ 0.3
CLTAP09496 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.94■□□□□ 0.3
CLTAP09496 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.94■□□□□ 0.3
CLTAP09496 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLTAP09496 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.94■□□□□ 0.3
CLTAP09496 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CLTAP09496 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.94■□□□□ 0.3
CLTAP09496 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CLTAP09496 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.94■□□□□ 0.3
CLTAP09496 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.94■□□□□ 0.3
CLTAP09496 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.94■□□□□ 0.3
CLTAP09496 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
CLTAP09496 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLTAP09496 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.94■□□□□ 0.3
CLTAP09496 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLTAP09496 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLTAP09496 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLTAP09496 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLTAP09496 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLTAP09496 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLTAP09496 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLTAP09496 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLTAP09496 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.94■□□□□ 0.3
CLTAP09496 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLTAP09496 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CLTAP09496 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CLTAP09496 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CLTAP09496 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CLTAP09496 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.93■□□□□ 0.3
CLTAP09496 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.93■□□□□ 0.3
CLTAP09496 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.93■□□□□ 0.3
CLTAP09496 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.93■□□□□ 0.3
CLTAP09496 VDAC1P7-201ENST00000462417 847 ntBASIC16.93■□□□□ 0.3
CLTAP09496 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.93■□□□□ 0.3
CLTAP09496 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CLTAP09496 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.93■□□□□ 0.3
CLTAP09496 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.93■□□□□ 0.3
CLTAP09496 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CLTAP09496 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLTAP09496 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.93■□□□□ 0.3
CLTAP09496 AC133539.2-201ENST00000604757 467 ntBASIC16.93■□□□□ 0.3
CLTAP09496 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.93■□□□□ 0.3
CLTAP09496 AL035252.4-201ENST00000624174 288 ntBASIC16.93■□□□□ 0.3
CLTAP09496 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CLTAP09496 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CLTAP09496 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.93■□□□□ 0.3
CLTAP09496 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms