Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3DP05423 AC126177.1-201ENST00000547829 2218 ntBASIC18.47■□□□□ 0.55
POLR3DP05423 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3DP05423 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
POLR3DP05423 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3DP05423 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
POLR3DP05423 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR3DP05423 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3DP05423 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
POLR3DP05423 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3DP05423 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
POLR3DP05423 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3DP05423 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3DP05423 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3DP05423 BAATP1-201ENST00000412284 1225 ntBASIC18.47■□□□□ 0.55
POLR3DP05423 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.47■□□□□ 0.55
POLR3DP05423 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.47■□□□□ 0.55
POLR3DP05423 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR3DP05423 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.47■□□□□ 0.55
POLR3DP05423 AP001889.1-201ENST00000525414 633 ntBASIC18.47■□□□□ 0.55
POLR3DP05423 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
POLR3DP05423 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR3DP05423 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR3DP05423 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.47■□□□□ 0.55
POLR3DP05423 MIR6775-201ENST00000617557 69 ntBASIC18.47■□□□□ 0.55
POLR3DP05423 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.47■□□□□ 0.55
POLR3DP05423 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3DP05423 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
POLR3DP05423 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3DP05423 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3DP05423 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3DP05423 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3DP05423 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR3DP05423 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
POLR3DP05423 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.47■□□□□ 0.55
POLR3DP05423 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3DP05423 AC134312.5-201ENST00000568031 1313 ntBASIC18.47■□□□□ 0.55
POLR3DP05423 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3DP05423 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
POLR3DP05423 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.47■□□□□ 0.55
POLR3DP05423 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
POLR3DP05423 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 PPT1-215ENST00000641471 2368 ntBASIC18.46■□□□□ 0.55
POLR3DP05423 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.46■□□□□ 0.55
POLR3DP05423 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.46■□□□□ 0.55
POLR3DP05423 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
POLR3DP05423 BOLA2P3-201ENST00000404566 256 ntBASIC18.46■□□□□ 0.55
POLR3DP05423 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 AL355864.2-201ENST00000447420 863 ntBASIC18.46■□□□□ 0.55
POLR3DP05423 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
POLR3DP05423 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.46■□□□□ 0.55
POLR3DP05423 SNX29P1-201ENST00000548357 1007 ntBASIC18.46■□□□□ 0.55
POLR3DP05423 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.46■□□□□ 0.55
POLR3DP05423 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.46■□□□□ 0.55
POLR3DP05423 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.46■□□□□ 0.55
POLR3DP05423 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
POLR3DP05423 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.46■□□□□ 0.55
POLR3DP05423 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 MSTO2P-201ENST00000314835 1709 ntBASIC18.46■□□□□ 0.55
POLR3DP05423 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3DP05423 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.46■□□□□ 0.54
POLR3DP05423 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.46■□□□□ 0.54
POLR3DP05423 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
POLR3DP05423 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
POLR3DP05423 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3DP05423 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
POLR3DP05423 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3DP05423 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3DP05423 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3DP05423 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
POLR3DP05423 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.45■□□□□ 0.54
POLR3DP05423 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
POLR3DP05423 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3DP05423 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.45■□□□□ 0.54
POLR3DP05423 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.45■□□□□ 0.54
POLR3DP05423 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3DP05423 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3DP05423 AC127383.1-201ENST00000444697 1800 ntBASIC18.45■□□□□ 0.54
POLR3DP05423 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3DP05423 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3DP05423 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
POLR3DP05423 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.45■□□□□ 0.54
POLR3DP05423 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.45■□□□□ 0.54
POLR3DP05423 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms