Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
CAPNS1P04632 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPNS1P04632 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPNS1P04632 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPNS1P04632 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPNS1P04632 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPNS1P04632 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
CAPNS1P04632 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPNS1P04632 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPNS1P04632 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPNS1P04632 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.42■□□□□ 0.06
CAPNS1P04632 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPNS1P04632 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.42■□□□□ 0.06
CAPNS1P04632 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CAPNS1P04632 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CAPNS1P04632 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
CAPNS1P04632 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPNS1P04632 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.41■□□□□ 0.06
CAPNS1P04632 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPNS1P04632 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPNS1P04632 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CAPNS1P04632 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPNS1P04632 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPNS1P04632 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPNS1P04632 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPNS1P04632 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPNS1P04632 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPNS1P04632 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPNS1P04632 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPNS1P04632 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.41■□□□□ 0.06
CAPNS1P04632 RPL7P3-201ENST00000441388 714 ntBASIC15.41■□□□□ 0.06
CAPNS1P04632 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.41■□□□□ 0.06
CAPNS1P04632 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPNS1P04632 AP000812.2-201ENST00000538934 718 ntBASIC15.41■□□□□ 0.06
CAPNS1P04632 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.41■□□□□ 0.06
CAPNS1P04632 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.41■□□□□ 0.06
CAPNS1P04632 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.41■□□□□ 0.06
CAPNS1P04632 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPNS1P04632 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CAPNS1P04632 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.41■□□□□ 0.06
CAPNS1P04632 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.41■□□□□ 0.06
CAPNS1P04632 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPNS1P04632 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CAPNS1P04632 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPNS1P04632 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPNS1P04632 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.41■□□□□ 0.06
CAPNS1P04632 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CAPNS1P04632 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPNS1P04632 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPNS1P04632 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPNS1P04632 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPNS1P04632 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPNS1P04632 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPNS1P04632 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPNS1P04632 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CAPNS1P04632 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CAPNS1P04632 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPNS1P04632 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CAPNS1P04632 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CAPNS1P04632 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPNS1P04632 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPNS1P04632 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPNS1P04632 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CAPNS1P04632 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
CAPNS1P04632 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPNS1P04632 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPNS1P04632 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPNS1P04632 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPNS1P04632 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPNS1P04632 AL592424.1-201ENST00000563624 1536 ntBASIC15.4■□□□□ 0.06
CAPNS1P04632 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.4■□□□□ 0.06
CAPNS1P04632 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CAPNS1P04632 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPNS1P04632 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CAPNS1P04632 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.4■□□□□ 0.06
CAPNS1P04632 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.4■□□□□ 0.06
CAPNS1P04632 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPNS1P04632 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.4■□□□□ 0.06
CAPNS1P04632 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPNS1P04632 ACTG1P3-201ENST00000431775 1114 ntBASIC15.4■□□□□ 0.06
CAPNS1P04632 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CAPNS1P04632 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPNS1P04632 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPNS1P04632 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPNS1P04632 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.4■□□□□ 0.06
CAPNS1P04632 RARRES2P5-201ENST00000564013 466 ntBASIC15.4■□□□□ 0.06
CAPNS1P04632 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPNS1P04632 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPNS1P04632 AC243960.2-201ENST00000600996 747 ntBASIC15.4■□□□□ 0.06
CAPNS1P04632 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CAPNS1P04632 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.4■□□□□ 0.06
CAPNS1P04632 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.4■□□□□ 0.06
CAPNS1P04632 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.4■□□□□ 0.06
CAPNS1P04632 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPNS1P04632 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPNS1P04632 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CAPNS1P04632 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPNS1P04632 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CAPNS1P04632 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPNS1P04632 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms