Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 AP001269.4-201ENST00000609611 512 ntBASIC13.48□□□□□ -0.25
DHFRP00374 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.48□□□□□ -0.25
DHFRP00374 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
DHFRP00374 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.48□□□□□ -0.25
DHFRP00374 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
DHFRP00374 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 AC113367.3-201ENST00000508316 1912 ntBASIC13.48□□□□□ -0.25
DHFRP00374 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
DHFRP00374 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.48□□□□□ -0.25
DHFRP00374 AC099521.3-201ENST00000624251 2938 ntBASIC13.48□□□□□ -0.25
DHFRP00374 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.48□□□□□ -0.25
DHFRP00374 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
DHFRP00374 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.48□□□□□ -0.25
DHFRP00374 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DHFRP00374 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
DHFRP00374 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
DHFRP00374 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
DHFRP00374 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.47□□□□□ -0.25
DHFRP00374 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.47□□□□□ -0.25
DHFRP00374 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
DHFRP00374 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.47□□□□□ -0.25
DHFRP00374 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.47□□□□□ -0.25
DHFRP00374 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.47□□□□□ -0.25
DHFRP00374 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
DHFRP00374 TSPY19P-201ENST00000418461 509 ntBASIC13.47□□□□□ -0.25
DHFRP00374 TSPY18P-201ENST00000441642 509 ntBASIC13.47□□□□□ -0.25
DHFRP00374 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.47□□□□□ -0.25
DHFRP00374 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.47□□□□□ -0.25
DHFRP00374 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.47□□□□□ -0.25
DHFRP00374 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.47□□□□□ -0.25
DHFRP00374 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.47□□□□□ -0.25
DHFRP00374 AL355877.3-201ENST00000622820 899 ntBASIC13.47□□□□□ -0.25
DHFRP00374 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.47□□□□□ -0.25
DHFRP00374 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.47□□□□□ -0.25
DHFRP00374 AC011474.4-201ENST00000623523 2076 ntBASIC13.47□□□□□ -0.25
DHFRP00374 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
DHFRP00374 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
DHFRP00374 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 AC152010.1-201ENST00000415779 2006 ntBASIC13.47□□□□□ -0.25
DHFRP00374 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
DHFRP00374 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 AC089987.1-201ENST00000551654 2209 ntBASIC13.47□□□□□ -0.25
DHFRP00374 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.47□□□□□ -0.25
DHFRP00374 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.47□□□□□ -0.25
DHFRP00374 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.47□□□□□ -0.25
DHFRP00374 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
DHFRP00374 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.47□□□□□ -0.25
DHFRP00374 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
DHFRP00374 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
DHFRP00374 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
DHFRP00374 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.46□□□□□ -0.25
DHFRP00374 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
DHFRP00374 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
DHFRP00374 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms