Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CBX6O95503 DUX4L27-201ENST00000554796 1261 ntBASIC15.52■□□□□ 0.08
CBX6O95503 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.52■□□□□ 0.08
CBX6O95503 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.52■□□□□ 0.08
CBX6O95503 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.52■□□□□ 0.08
CBX6O95503 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX6O95503 AC009093.7-201ENST00000623853 1223 ntBASIC15.52■□□□□ 0.08
CBX6O95503 AF228730.6-201ENST00000641497 218 ntBASIC15.52■□□□□ 0.08
CBX6O95503 AC084121.3-201ENST00000641716 218 ntBASIC15.52■□□□□ 0.08
CBX6O95503 AC105233.6-201ENST00000642093 218 ntBASIC15.52■□□□□ 0.08
CBX6O95503 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX6O95503 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
CBX6O95503 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.52■□□□□ 0.07
CBX6O95503 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX6O95503 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX6O95503 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
CBX6O95503 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX6O95503 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CBX6O95503 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CBX6O95503 ST20-AS1-201ENST00000560255 4223 ntBASIC15.52■□□□□ 0.07
CBX6O95503 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.52■□□□□ 0.07
CBX6O95503 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX6O95503 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CBX6O95503 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CBX6O95503 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CBX6O95503 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CBX6O95503 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.51■□□□□ 0.07
CBX6O95503 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CBX6O95503 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.51■□□□□ 0.07
CBX6O95503 BX640514.1-201ENST00000583223 1918 ntBASIC15.51■□□□□ 0.07
CBX6O95503 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CBX6O95503 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.51■□□□□ 0.07
CBX6O95503 PMS2P4-201ENST00000412466 1052 ntBASIC15.51■□□□□ 0.07
CBX6O95503 AL513480.1-201ENST00000451731 511 ntBASIC15.51■□□□□ 0.07
CBX6O95503 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.51■□□□□ 0.07
CBX6O95503 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.51■□□□□ 0.07
CBX6O95503 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CBX6O95503 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CBX6O95503 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CBX6O95503 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.51■□□□□ 0.07
CBX6O95503 WASH6P-202ENST00000359512 1437 ntBASIC15.51■□□□□ 0.07
CBX6O95503 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.51■□□□□ 0.07
CBX6O95503 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.51■□□□□ 0.07
CBX6O95503 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CBX6O95503 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.51■□□□□ 0.07
CBX6O95503 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX6O95503 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX6O95503 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX6O95503 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CBX6O95503 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.5■□□□□ 0.07
CBX6O95503 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX6O95503 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX6O95503 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CBX6O95503 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
CBX6O95503 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.5■□□□□ 0.07
CBX6O95503 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.5■□□□□ 0.07
CBX6O95503 AC063926.2-201ENST00000623766 1308 ntBASIC15.5■□□□□ 0.07
CBX6O95503 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
CBX6O95503 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX6O95503 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX6O95503 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX6O95503 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CBX6O95503 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CBX6O95503 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX6O95503 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.5■□□□□ 0.07
CBX6O95503 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CBX6O95503 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX6O95503 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CBX6O95503 AL627223.1-201ENST00000416693 442 ntBASIC15.5■□□□□ 0.07
CBX6O95503 AC015922.1-201ENST00000421102 1152 ntBASIC15.5■□□□□ 0.07
CBX6O95503 ADH5P3-201ENST00000433842 1137 ntBASIC15.5■□□□□ 0.07
CBX6O95503 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CBX6O95503 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.5■□□□□ 0.07
CBX6O95503 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX6O95503 INGX-202ENST00000489074 768 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms