Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRDV1A0A1B0GX56 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 TPT1P11-201ENST00000458482 498 ntBASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 RNA5SP410-201ENST00000516285 106 ntBASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 AL031008.1-201ENST00000619963 541 ntBASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 AC055811.4-201ENST00000624039 1754 ntBASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRDV1A0A1B0GX56 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 FAM220BP-201ENST00000377689 816 ntBASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 UNC93B6-202ENST00000528242 690 ntBASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.62□□□□□ -0.23
TRDV1A0A1B0GX56 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms