Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 EIF4HP1-201ENST00000453115 687 ntBASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 PPY2P-201ENST00000582808 702 ntBASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 AC092364.2-201ENST00000596710 2692 ntBASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC187A0A096LP49 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC187A0A096LP49 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC187A0A096LP49 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC187A0A096LP49 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC187A0A096LP49 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 AC138649.2-201ENST00000615886 705 ntBASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 AC138627.1-207ENST00000641560 1006 ntBASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 AC007787.1-201ENST00000588095 1583 ntBASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC187A0A096LP49 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 MIR769-201ENST00000390225 118 ntBASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 MIR3619-201ENST00000579667 83 ntBASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 RN7SL713P-201ENST00000582127 302 ntBASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 ZACNP1-201ENST00000612259 710 ntBASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC187A0A096LP49 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms