Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 AC144831.1-201ENST00000573312 2656 ntBASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 RN7SL752P-201ENST00000463779 287 ntBASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 AC120057.1-201ENST00000483947 663 ntBASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 AC148477.4-201ENST00000613430 1793 ntBASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 AC023024.2-201ENST00000623561 1993 ntBASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 AC098614.1-201ENST00000368528 745 ntBASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 SOCS2P1-201ENST00000417727 557 ntBASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 AL358472.5-202ENST00000641448 1267 ntBASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 AL138799.1-201ENST00000448213 1675 ntBASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 AL109954.1-202ENST00000564051 2148 ntBASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 FLJ16779-201ENST00000612722 7638 ntBASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 KRT8P44-201ENST00000441609 1350 ntBASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 KRT8P22-201ENST00000562317 1415 ntBASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGC4Q9Y5F7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
PCDHGC4Q9Y5F7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGC4Q9Y5F7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGC4Q9Y5F7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGC4Q9Y5F7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGC4Q9Y5F7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGC4Q9Y5F7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGC4Q9Y5F7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGC4Q9Y5F7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGC4Q9Y5F7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms