Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 CICP17-201ENST00000418553 2377 ntBASIC14.69□□□□□ -0.06
AP4S1Q9Y587 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.69□□□□□ -0.06
AP4S1Q9Y587 TMPOP1-202ENST00000424642 1267 ntBASIC14.69□□□□□ -0.06
AP4S1Q9Y587 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 AC061975.2-201ENST00000581722 295 ntBASIC14.69□□□□□ -0.06
AP4S1Q9Y587 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 AL356488.2-201ENST00000602755 427 ntBASIC14.69□□□□□ -0.06
AP4S1Q9Y587 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.68□□□□□ -0.06
AP4S1Q9Y587 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.68□□□□□ -0.06
AP4S1Q9Y587 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 CICP20-201ENST00000443330 2801 ntBASIC14.68□□□□□ -0.06
AP4S1Q9Y587 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP4S1Q9Y587 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
AP4S1Q9Y587 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms