Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 ENPP7P5-201ENST00000541031 1031 ntBASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 AL033527.5-201ENST00000641382 801 ntBASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHA4Q9UN74 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 BX539320.1-201ENST00000623759 877 ntBASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHA4Q9UN74 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 AL359258.3-201ENST00000622910 2331 ntBASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 AC098614.1-201ENST00000368528 745 ntBASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 AL035633.1-201ENST00000406139 838 ntBASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 AP006294.1-201ENST00000415407 339 ntBASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 AL162726.2-201ENST00000438986 1017 ntBASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 AP005018.1-201ENST00000525475 301 ntBASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 AP001582.1-201ENST00000525856 295 ntBASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 CU634019.7-201ENST00000624153 1185 ntBASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 AC005252.2-201ENST00000624630 1141 ntBASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 FP236241.2-201ENST00000624906 1185 ntBASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHA4Q9UN74 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms