Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THUMPD1Q9NXG2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.63□□□□□ -0.07
THUMPD1Q9NXG2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 FAM58DP-201ENST00000428076 619 ntBASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 ZBED1P1-201ENST00000502364 1930 ntBASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.62□□□□□ -0.07
THUMPD1Q9NXG2 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 SPDYE14P-201ENST00000442619 822 ntBASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 AC026150.2-201ENST00000564693 1156 ntBASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
THUMPD1Q9NXG2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.6□□□□□ -0.07
THUMPD1Q9NXG2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
THUMPD1Q9NXG2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
THUMPD1Q9NXG2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THUMPD1Q9NXG2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THUMPD1Q9NXG2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
THUMPD1Q9NXG2 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
THUMPD1Q9NXG2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
THUMPD1Q9NXG2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.6□□□□□ -0.07
THUMPD1Q9NXG2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
THUMPD1Q9NXG2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
THUMPD1Q9NXG2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.6□□□□□ -0.07
THUMPD1Q9NXG2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
THUMPD1Q9NXG2 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.6□□□□□ -0.07
THUMPD1Q9NXG2 GPS2P2-201ENST00000430745 888 ntBASIC14.6□□□□□ -0.07
THUMPD1Q9NXG2 AC023141.5-201ENST00000458585 616 ntBASIC14.6□□□□□ -0.07
THUMPD1Q9NXG2 SLED1-202ENST00000512051 380 ntBASIC14.6□□□□□ -0.07
THUMPD1Q9NXG2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms