Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
C12orf4Q9NQ89 CICP11-201ENST00000434745 2827 ntBASIC13.6□□□□□ -0.23
C12orf4Q9NQ89 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.6□□□□□ -0.23
C12orf4Q9NQ89 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C12orf4Q9NQ89 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
C12orf4Q9NQ89 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
C12orf4Q9NQ89 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
C12orf4Q9NQ89 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C12orf4Q9NQ89 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
C12orf4Q9NQ89 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C12orf4Q9NQ89 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C12orf4Q9NQ89 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
C12orf4Q9NQ89 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.6□□□□□ -0.23
C12orf4Q9NQ89 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
C12orf4Q9NQ89 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 DMBT1P1-203ENST00000636837 4628 ntBASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 UNC93B7-201ENST00000509439 705 ntBASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 REXO1L1P-202ENST00000608646 1974 ntBASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 AC087481.3-201ENST00000602886 1894 ntBASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C12orf4Q9NQ89 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
C12orf4Q9NQ89 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
C12orf4Q9NQ89 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
C12orf4Q9NQ89 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
C12orf4Q9NQ89 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
C12orf4Q9NQ89 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
C12orf4Q9NQ89 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
C12orf4Q9NQ89 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 IGLL3P-201ENST00000412472 434 ntBASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 MIR4321-201ENST00000592276 80 ntBASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.58□□□□□ -0.24
C12orf4Q9NQ89 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms