Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 AC023090.2-201ENST00000625182 2110 ntBASIC20.18■□□□□ 0.82
TRPM3Q9HCF6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRPM3Q9HCF6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRPM3Q9HCF6 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRPM3Q9HCF6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRPM3Q9HCF6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRPM3Q9HCF6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TRPM3Q9HCF6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRPM3Q9HCF6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 NKILA-202ENST00000614771 2598 ntBASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 NME2-201ENST00000393183 568 ntTSL 2 BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 DUTP3-201ENST00000450025 415 ntBASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 PFN2-206ENST00000461930 606 ntTSL 4 BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 RN7SL81P-201ENST00000493781 261 ntBASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 AC027237.1-201ENST00000560942 655 ntBASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 AC005041.3-201ENST00000606287 649 ntBASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 MIR6858-201ENST00000620733 67 ntBASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 AC127024.7-201ENST00000625101 200 ntBASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 AC092299.1-201ENST00000632679 757 ntBASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 ZBED1P1-201ENST00000502364 1930 ntBASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC20.17■□□□□ 0.82
TRPM3Q9HCF6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 AC012508.2-201ENST00000567613 1472 ntBASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 AC079112.1-201ENST00000454972 939 ntBASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 AL022334.2-201ENST00000610000 484 ntBASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 AL357563.1-201ENST00000404728 395 ntBASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 AC008723.1-201ENST00000506922 207 ntBASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 AC141586.1-203ENST00000567242 366 ntBASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 AC005357.2-202ENST00000590507 1060 ntBASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.16■□□□□ 0.82
TRPM3Q9HCF6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 BX088702.1-201ENST00000610784 235 ntBASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 PCDHA14-201ENST00000506751 2298 ntBASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRPM3Q9HCF6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms