Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 AC097359.3-201ENST00000603982 1210 ntBASIC19.08■□□□□ 0.64
UPF2Q9HAU5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 AC008267.7-201ENST00000624570 1194 ntBASIC19.08■□□□□ 0.64
UPF2Q9HAU5 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPF2Q9HAU5 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 ACE3P-201ENST00000423435 1973 ntBASIC19.07■□□□□ 0.64
UPF2Q9HAU5 MIR1224-201ENST00000408193 85 ntBASIC19.07■□□□□ 0.64
UPF2Q9HAU5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 AC079781.3-201ENST00000449110 356 ntBASIC19.07■□□□□ 0.64
UPF2Q9HAU5 AP002472.1-201ENST00000577490 586 ntBASIC19.07■□□□□ 0.64
UPF2Q9HAU5 AC027307.2-201ENST00000591252 911 ntBASIC19.07■□□□□ 0.64
UPF2Q9HAU5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPF2Q9HAU5 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 CICP11-201ENST00000434745 2827 ntBASIC19.06■□□□□ 0.64
UPF2Q9HAU5 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 AC117489.1-201ENST00000625169 3217 ntBASIC19.06■□□□□ 0.64
UPF2Q9HAU5 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 HLA-H-201ENST00000383620 1096 ntBASIC19.06■□□□□ 0.64
UPF2Q9HAU5 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 AC064836.3-201ENST00000607928 673 ntBASIC19.06■□□□□ 0.64
UPF2Q9HAU5 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 PCDHGB8P-201ENST00000502926 1973 ntBASIC19.06■□□□□ 0.64
UPF2Q9HAU5 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC19.06■□□□□ 0.64
UPF2Q9HAU5 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms