Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AC244157.2-201ENST00000616239 1006 ntBASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 AC011491.1-203ENST00000637688 543 ntBASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 AL121723.1-201ENST00000445194 1519 ntBASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 KRT18P43-201ENST00000469825 1281 ntBASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2OQ9C0C9 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 TPM3P8-201ENST00000330554 643 ntBASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 RPL13AP19-201ENST00000434320 584 ntBASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 COX6A1P2-201ENST00000620597 330 ntBASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2OQ9C0C9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBE2OQ9C0C9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBE2OQ9C0C9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBE2OQ9C0C9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBE2OQ9C0C9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UBE2OQ9C0C9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms