Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.53■□□□□ 0.56
RTFDC1Q9BY42 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 PUDPP3-201ENST00000445368 636 ntBASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 AL596276.2-201ENST00000447525 331 ntBASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 MIR4683-201ENST00000579659 81 ntBASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 AL353726.2-201ENST00000623259 884 ntBASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTFDC1Q9BY42 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RTFDC1Q9BY42 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RTFDC1Q9BY42 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
RTFDC1Q9BY42 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
RTFDC1Q9BY42 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RTFDC1Q9BY42 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
RTFDC1Q9BY42 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 AC026434.2-201ENST00000506094 1078 ntBASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 AL353770.1-201ENST00000614915 403 ntBASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
RTFDC1Q9BY42 FKBP4P6-201ENST00000457486 1332 ntBASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms