Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.6■□□□□ 0.09
NDNQ99608 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.6■□□□□ 0.09
NDNQ99608 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
NDNQ99608 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.6■□□□□ 0.09
NDNQ99608 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.6■□□□□ 0.09
NDNQ99608 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.6■□□□□ 0.09
NDNQ99608 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NDNQ99608 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.6■□□□□ 0.09
NDNQ99608 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.6■□□□□ 0.09
NDNQ99608 AC069262.1-201ENST00000539058 672 ntBASIC15.6■□□□□ 0.09
NDNQ99608 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.6■□□□□ 0.09
NDNQ99608 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
NDNQ99608 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.6■□□□□ 0.09
NDNQ99608 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.6■□□□□ 0.09
NDNQ99608 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.6■□□□□ 0.09
NDNQ99608 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.6■□□□□ 0.09
NDNQ99608 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.6■□□□□ 0.09
NDNQ99608 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 CETN4P-206ENST00000642099 2168 ntBASIC15.6■□□□□ 0.09
NDNQ99608 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 AC126755.1-201ENST00000525846 6405 ntBASIC15.6■□□□□ 0.09
NDNQ99608 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.6■□□□□ 0.09
NDNQ99608 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
NDNQ99608 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.6■□□□□ 0.09
NDNQ99608 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
NDNQ99608 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.6■□□□□ 0.09
NDNQ99608 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.59■□□□□ 0.09
NDNQ99608 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
NDNQ99608 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.59■□□□□ 0.09
NDNQ99608 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.59■□□□□ 0.09
NDNQ99608 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 AL139400.1-201ENST00000366220 510 ntBASIC15.59■□□□□ 0.09
NDNQ99608 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 MIR1233-2-201ENST00000408138 82 ntBASIC15.59■□□□□ 0.09
NDNQ99608 MIR1233-1-201ENST00000408722 82 ntBASIC15.59■□□□□ 0.09
NDNQ99608 RPL37AP1-201ENST00000412502 279 ntBASIC15.59■□□□□ 0.09
NDNQ99608 AC074338.1-201ENST00000416825 156 ntBASIC15.59■□□□□ 0.09
NDNQ99608 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.59■□□□□ 0.09
NDNQ99608 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.59■□□□□ 0.09
NDNQ99608 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.59■□□□□ 0.09
NDNQ99608 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.59■□□□□ 0.09
NDNQ99608 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
NDNQ99608 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.59■□□□□ 0.09
NDNQ99608 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.59■□□□□ 0.09
NDNQ99608 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.59■□□□□ 0.09
NDNQ99608 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NDNQ99608 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.59■□□□□ 0.09
NDNQ99608 Z92544.3-201ENST00000624747 417 ntBASIC15.59■□□□□ 0.09
NDNQ99608 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.59■□□□□ 0.09
NDNQ99608 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.59■□□□□ 0.09
NDNQ99608 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NDNQ99608 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
NDNQ99608 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
NDNQ99608 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDNQ99608 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.58■□□□□ 0.09
NDNQ99608 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NDNQ99608 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NDNQ99608 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.58■□□□□ 0.09
NDNQ99608 AC126365.1-201ENST00000578585 1514 ntBASIC15.58■□□□□ 0.09
NDNQ99608 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
NDNQ99608 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NDNQ99608 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NDNQ99608 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms