Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 AC023141.13-201ENST00000604991 943 ntBASIC12.62□□□□□ -0.39
RAB40CQ96S21 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 CRYGEP-201ENST00000412192 528 ntBASIC12.61□□□□□ -0.39
RAB40CQ96S21 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 RHOQP3-201ENST00000437982 621 ntBASIC12.61□□□□□ -0.39
RAB40CQ96S21 EEF1DP4-201ENST00000446006 880 ntBASIC12.61□□□□□ -0.39
RAB40CQ96S21 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 SLC25A6P4-201ENST00000586535 553 ntBASIC12.61□□□□□ -0.39
RAB40CQ96S21 AL049840.3-201ENST00000602669 611 ntBASIC12.61□□□□□ -0.39
RAB40CQ96S21 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 AC116407.3-201ENST00000623905 1129 ntBASIC12.61□□□□□ -0.39
RAB40CQ96S21 AC117500.6-201ENST00000624871 588 ntBASIC12.61□□□□□ -0.39
RAB40CQ96S21 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 AC117489.1-201ENST00000625169 3217 ntBASIC12.61□□□□□ -0.39
RAB40CQ96S21 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB40CQ96S21 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB40CQ96S21 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms