Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NEK1Q96PY6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.31■□□□□ 0.52
NEK1Q96PY6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NEK1Q96PY6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.31■□□□□ 0.52
NEK1Q96PY6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NEK1Q96PY6 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.31■□□□□ 0.52
NEK1Q96PY6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NEK1Q96PY6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NEK1Q96PY6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NEK1Q96PY6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.31■□□□□ 0.52
NEK1Q96PY6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NEK1Q96PY6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NEK1Q96PY6 AC068587.6-202ENST00000641839 5619 ntBASIC18.31■□□□□ 0.52
NEK1Q96PY6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.31■□□□□ 0.52
NEK1Q96PY6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NEK1Q96PY6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NEK1Q96PY6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 RN7SL399P-201ENST00000471648 279 ntBASIC18.3■□□□□ 0.52
NEK1Q96PY6 FAM86LP-201ENST00000478302 853 ntBASIC18.3■□□□□ 0.52
NEK1Q96PY6 GAPDHP40-201ENST00000505218 1006 ntBASIC18.3■□□□□ 0.52
NEK1Q96PY6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 MIR4745-201ENST00000577608 62 ntBASIC18.3■□□□□ 0.52
NEK1Q96PY6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEK1Q96PY6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NEK1Q96PY6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEK1Q96PY6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEK1Q96PY6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEK1Q96PY6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEK1Q96PY6 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.29■□□□□ 0.52
NEK1Q96PY6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NEK1Q96PY6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEK1Q96PY6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEK1Q96PY6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEK1Q96PY6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NEK1Q96PY6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEK1Q96PY6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 AC036164.1-201ENST00000570544 333 ntBASIC18.29■□□□□ 0.52
NEK1Q96PY6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 AC138761.1-201ENST00000584393 385 ntBASIC18.29■□□□□ 0.52
NEK1Q96PY6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEK1Q96PY6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NEK1Q96PY6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEK1Q96PY6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEK1Q96PY6 REXO1L4P-201ENST00000605109 1937 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms