Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPRD1AQ96P16 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 AL138799.1-201ENST00000448213 1675 ntBASIC15.93■□□□□ 0.14
RPRD1AQ96P16 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 TTTY23B-201ENST00000442790 549 ntBASIC15.93■□□□□ 0.14
RPRD1AQ96P16 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 GIMAP3P-201ENST00000495150 836 ntBASIC15.93■□□□□ 0.14
RPRD1AQ96P16 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 TMBIM7P-203ENST00000641617 1718 ntBASIC15.93■□□□□ 0.14
RPRD1AQ96P16 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.93■□□□□ 0.14
RPRD1AQ96P16 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 AC007389.4-201ENST00000454674 793 ntBASIC15.92■□□□□ 0.14
RPRD1AQ96P16 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 AP001582.1-201ENST00000525856 295 ntBASIC15.92■□□□□ 0.14
RPRD1AQ96P16 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms