Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
NSMCE2Q96MF7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NSMCE2Q96MF7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
NSMCE2Q96MF7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NSMCE2Q96MF7 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NSMCE2Q96MF7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NSMCE2Q96MF7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.68□□□□□ -0.06
NSMCE2Q96MF7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.68□□□□□ -0.06
NSMCE2Q96MF7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NSMCE2Q96MF7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NSMCE2Q96MF7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NSMCE2Q96MF7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 FAM220BP-201ENST00000377689 816 ntBASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 AC136604.1-201ENST00000418535 575 ntBASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 AL031284.1-201ENST00000419297 478 ntBASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 RARRES2P8-201ENST00000566335 367 ntBASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 AL773604.1-201ENST00000617417 272 ntBASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 AC116407.3-201ENST00000623905 1129 ntBASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NSMCE2Q96MF7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 AC026979.3-201ENST00000607315 403 ntBASIC14.66□□□□□ -0.06
NSMCE2Q96MF7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms