Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 KRT18P64-201ENST00000434946 1219 ntBASIC15.18■□□□□ 0.02
ATL1Q8WXF7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 AL161772.1-201ENST00000610494 4412 ntBASIC15.18■□□□□ 0.02
ATL1Q8WXF7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATL1Q8WXF7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 AC148477.4-201ENST00000613430 1793 ntBASIC15.17■□□□□ 0.02
ATL1Q8WXF7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 AC022144.1-201ENST00000602255 1580 ntBASIC15.17■□□□□ 0.02
ATL1Q8WXF7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 RFPL4AP1-201ENST00000530883 850 ntBASIC15.17■□□□□ 0.02
ATL1Q8WXF7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 AC004461.2-201ENST00000629517 803 ntBASIC15.17■□□□□ 0.02
ATL1Q8WXF7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 AL121723.1-201ENST00000445194 1519 ntBASIC15.17■□□□□ 0.02
ATL1Q8WXF7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATL1Q8WXF7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
ATL1Q8WXF7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATL1Q8WXF7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATL1Q8WXF7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATL1Q8WXF7 AC104581.4-201ENST00000623126 3052 ntBASIC15.16■□□□□ 0.02
ATL1Q8WXF7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.16■□□□□ 0.02
ATL1Q8WXF7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATL1Q8WXF7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATL1Q8WXF7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATL1Q8WXF7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATL1Q8WXF7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATL1Q8WXF7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATL1Q8WXF7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATL1Q8WXF7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATL1Q8WXF7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.16■□□□□ 0.02
ATL1Q8WXF7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
ATL1Q8WXF7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATL1Q8WXF7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ATL1Q8WXF7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms