Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM41Q8WV44 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC26.32■■□□□ 1.8
TRIM41Q8WV44 AC098935.1-201ENST00000446057 611 ntBASIC26.32■■□□□ 1.8
TRIM41Q8WV44 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC26.32■■□□□ 1.8
TRIM41Q8WV44 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC26.32■■□□□ 1.8
TRIM41Q8WV44 RN7SL596P-201ENST00000582123 288 ntBASIC26.32■■□□□ 1.8
TRIM41Q8WV44 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
TRIM41Q8WV44 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC26.32■■□□□ 1.8
TRIM41Q8WV44 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM41Q8WV44 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC26.32■■□□□ 1.8
TRIM41Q8WV44 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM41Q8WV44 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM41Q8WV44 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM41Q8WV44 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC26.32■■□□□ 1.8
TRIM41Q8WV44 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM41Q8WV44 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 GAPDHP40-201ENST00000505218 1006 ntBASIC26.31■■□□□ 1.8
TRIM41Q8WV44 COX5BP1-201ENST00000507622 393 ntBASIC26.31■■□□□ 1.8
TRIM41Q8WV44 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
TRIM41Q8WV44 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 MTX1P1-201ENST00000440904 838 ntBASIC26.3■■□□□ 1.8
TRIM41Q8WV44 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM41Q8WV44 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 AC025271.4-201ENST00000621477 1726 ntBASIC26.29■■□□□ 1.8
TRIM41Q8WV44 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 MDH2-205ENST00000461263 648 ntTSL 2 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 AC106794.1-201ENST00000506935 792 ntBASIC26.29■■□□□ 1.8
TRIM41Q8WV44 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM41Q8WV44 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms