Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
U2AF1L4Q8WU68 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
U2AF1L4Q8WU68 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
U2AF1L4Q8WU68 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
U2AF1L4Q8WU68 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.71■□□□□ 0.43
U2AF1L4Q8WU68 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.71■□□□□ 0.42
U2AF1L4Q8WU68 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 MIR33B-201ENST00000385104 96 ntBASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 POU5F1P6-201ENST00000466990 990 ntBASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 AL096828.3-201ENST00000615354 462 ntBASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
U2AF1L4Q8WU68 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 NDUFV2P1-201ENST00000596415 907 ntBASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 AC010491.1-201ENST00000563101 2797 ntBASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 AL603832.2-201ENST00000566195 2125 ntBASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
U2AF1L4Q8WU68 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
U2AF1L4Q8WU68 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
U2AF1L4Q8WU68 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
U2AF1L4Q8WU68 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms