Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
SVIPQ8NHG7 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
SVIPQ8NHG7 RIC3-201ENST00000309737 2859 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SVIPQ8NHG7 MUC21-202ENST00000486149 2527 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
SVIPQ8NHG7 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SVIPQ8NHG7 AC064805.1-202ENST00000569279 3493 ntBASIC9.4□□□□□ -0.91
SVIPQ8NHG7 GOT2-201ENST00000245206 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SVIPQ8NHG7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC9.4□□□□□ -0.91
SVIPQ8NHG7 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC9.4□□□□□ -0.91
SVIPQ8NHG7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SVIPQ8NHG7 AC027801.1-201ENST00000376609 2100 ntTSL 2 BASIC9.4□□□□□ -0.91
SVIPQ8NHG7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC9.4□□□□□ -0.91
SVIPQ8NHG7 SUSD4-207ENST00000484758 2736 ntTSL 2 BASIC9.4□□□□□ -0.91
SVIPQ8NHG7 AC090987.1-201ENST00000523502 2072 ntTSL 2 BASIC9.4□□□□□ -0.91
SVIPQ8NHG7 AC092135.1-201ENST00000623398 2059 ntBASIC9.4□□□□□ -0.91
SVIPQ8NHG7 PDXK-209ENST00000467908 7194 ntTSL 3 BASIC9.4□□□□□ -0.91
SVIPQ8NHG7 RBM24-201ENST00000318204 2394 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 STX16-204ENST00000359617 4273 ntTSL 5 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 TRPV5-201ENST00000265310 2952 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 RUBCNL-206ENST00000409879 2997 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 UNC45A-216ENST00000639885 3255 ntTSL 5 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 ERCC1-202ENST00000300853 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 PRIMA1-202ENST00000393140 3711 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 PROCR-201ENST00000216968 1348 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 ST3GAL6-201ENST00000265261 3362 ntTSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 PRICKLE1-209ENST00000552240 3311 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 SOSTDC1-201ENST00000307068 1869 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 HADHA-201ENST00000380649 3037 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 CTSL-202ENST00000342020 933 ntTSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 AL133325.2-201ENST00000431034 449 ntTSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 AL161937.2-202ENST00000435301 733 ntTSL 3 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 ZFYVE28-206ENST00000508471 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 AC096759.2-202ENST00000515230 777 ntTSL 3 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 AOAH-211ENST00000617537 2381 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 USP6NL-202ENST00000379237 4546 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 EPHA6-201ENST00000389672 3971 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 GPAA1P2-202ENST00000606848 1787 ntBASIC9.39□□□□□ -0.91
SVIPQ8NHG7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 AC093525.6-201ENST00000563449 2001 ntBASIC9.39□□□□□ -0.91
SVIPQ8NHG7 SULF1-223ENST00000616868 3381 ntTSL 5 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 BAG6-235ENST00000362049 3626 ntTSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 BIVM-201ENST00000257336 3859 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 USP3-204ENST00000540797 5474 ntTSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 HACL1-213ENST00000628377 2214 ntTSL 5 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 LARP4B-201ENST00000316157 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 LINC00665-208ENST00000591372 2732 ntTSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 C14orf159-201ENST00000256324 2967 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 ADD1-210ENST00000503455 3206 ntTSL 5 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 ARMCX3-201ENST00000341189 3730 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 AC092159.2-201ENST00000445418 1943 ntTSL 2 BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
SVIPQ8NHG7 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 ARHGAP42P2-201ENST00000416089 2140 ntBASIC9.38□□□□□ -0.91
SVIPQ8NHG7 AC005154.3-201ENST00000419639 1393 ntBASIC9.38□□□□□ -0.91
SVIPQ8NHG7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 CACNA1C-210ENST00000399606 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms