RNA–Protein interactions for RNA: ENST00000508471.5

ZFYVE28-206, Transcript of zinc finger FYVE-type containing 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZFYVE28, Length 3,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28-206ENST00000508471 NISCHQ9Y2I1 1504 aa21.29■■□□□ 1
ZFYVE28-206ENST00000508471 DCAF8L2P0C7V8 631 aa19.98■□□□□ 0.79
ZFYVE28-206ENST00000508471 SHROOM4Q9ULL8 1493 aa19.96■□□□□ 0.79
ZFYVE28-206ENST00000508471 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
ZFYVE28-206ENST00000508471 EHMT2Q96KQ7 1210 aa19.09■□□□□ 0.65
ZFYVE28-206ENST00000508471 PCGF6Q9BYE7 350 aa18.9■□□□□ 0.62
ZFYVE28-206ENST00000508471 FAM9AQ8IZU1 332 aaPredicted RBP18.65■□□□□ 0.58
ZFYVE28-206ENST00000508471 PPARGC1BQ86YN6 1023 aaKnown RBP18.55■□□□□ 0.56
ZFYVE28-206ENST00000508471 LOC105371045A0A1W2PR82 267 aa18.54■□□□□ 0.56
ZFYVE28-206ENST00000508471 CHIC1Q5VXU3 224 aa18.47■□□□□ 0.55
ZFYVE28-206ENST00000508471 TTBK1Q5TCY1 1321 aaPredicted RBP18.41■□□□□ 0.54
ZFYVE28-206ENST00000508471 HRCP23327 699 aa18.38■□□□□ 0.53
ZFYVE28-206ENST00000508471 PELP1Q8IZL8 1130 aaKnown RBP18.36■□□□□ 0.53
ZFYVE28-206ENST00000508471 TRIM41Q8WV44 630 aa18.1■□□□□ 0.49
ZFYVE28-206ENST00000508471 MYO15BQ96JP2 1530 aa18.03■□□□□ 0.48
ZFYVE28-206ENST00000508471 CCDC180Q9P1Z9 1646 aa18.03■□□□□ 0.48
ZFYVE28-206ENST00000508471 RANGAP1P46060 587 aaPredicted RBP17.89■□□□□ 0.45
ZFYVE28-206ENST00000508471 ZCCHC6Q5VYS8 1495 aaKnown RBP17.88■□□□□ 0.45
ZFYVE28-206ENST00000508471 TRIM26Q12899 539 aaPredicted RBP17.86■□□□□ 0.45
ZFYVE28-206ENST00000508471 MYT1Q01538 1121 aa17.76■□□□□ 0.43
ZFYVE28-206ENST00000508471 CCER1Q8TC90 406 aaPredicted RBP17.75■□□□□ 0.43
ZFYVE28-206ENST00000508471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.69■□□□□ 0.42
ZFYVE28-206ENST00000508471 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
ZFYVE28-206ENST00000508471 YTHDC1Q96MU7 727 aaKnown RBP17.59■□□□□ 0.41
ZFYVE28-206ENST00000508471 ABCC9O60706 1549 aa17.55■□□□□ 0.4
ZFYVE28-206ENST00000508471 UBTFP17480 764 aaKnown RBP17.55■□□□□ 0.4
ZFYVE28-206ENST00000508471 ZEB1P37275 1124 aaPredicted RBP17.48■□□□□ 0.39
ZFYVE28-206ENST00000508471 HNRNPUL2Q1KMD3 747 aaKnown RBP17.37■□□□□ 0.37
ZFYVE28-206ENST00000508471 APLP2Q06481 763 aa17.3■□□□□ 0.36
ZFYVE28-206ENST00000508471 SCRIBQ14160 1630 aa17.27■□□□□ 0.36
ZFYVE28-206ENST00000508471 PABPN1Q86U42 306 aaKnown RBP eCLIP17.25■□□□□ 0.35
ZFYVE28-206ENST00000508471 DCAF1Q9Y4B6 1507 aa17.22■□□□□ 0.35
ZFYVE28-206ENST00000508471 DIEXFQ68CQ4 756 aaKnown RBP17.2■□□□□ 0.34
ZFYVE28-206ENST00000508471 CENPBP07199 599 aaPredicted RBP17.19■□□□□ 0.34
ZFYVE28-206ENST00000508471 ITGAEP38570 1179 aa17.17■□□□□ 0.34
ZFYVE28-206ENST00000508471 GTF3C3Q9Y5Q9 886 aa17.15■□□□□ 0.34
ZFYVE28-206ENST00000508471 ACIN1Q9UKV3 1341 aaKnown RBP17.13■□□□□ 0.33
ZFYVE28-206ENST00000508471 ATP1B4Q9UN42 357 aaPredicted RBP17.11■□□□□ 0.33
ZFYVE28-206ENST00000508471 NEUROD1Q13562 356 aa17.1■□□□□ 0.33
ZFYVE28-206ENST00000508471 RSF1Q96T23 1441 aaPredicted RBP17.08■□□□□ 0.32
ZFYVE28-206ENST00000508471 CECR2Q9BXF3 1484 aa16.94■□□□□ 0.3
ZFYVE28-206ENST00000508471 RB1CC1Q8TDY2 1594 aa16.88■□□□□ 0.29
ZFYVE28-206ENST00000508471 NACADO15069 1562 aa16.85■□□□□ 0.29
ZFYVE28-206ENST00000508471 CSRNP3Q8WYN3 585 aa16.85■□□□□ 0.29
ZFYVE28-206ENST00000508471 ZNF316A6NFI3 1004 aaPredicted RBP16.78■□□□□ 0.28
ZFYVE28-206ENST00000508471 MIER1Q8N108 512 aa16.73■□□□□ 0.27
ZFYVE28-206ENST00000508471 CNGB1Q14028 1251 aaPredicted RBP16.72■□□□□ 0.27
ZFYVE28-206ENST00000508471 BCANQ96GW7 911 aa16.72■□□□□ 0.27
ZFYVE28-206ENST00000508471 MROH2BQ7Z745 1585 aa16.67■□□□□ 0.26
ZFYVE28-206ENST00000508471 BCL11AQ9H165 835 aa16.67■□□□□ 0.26
ZFYVE28-206ENST00000508471 P3H3Q8IVL6 736 aa16.65■□□□□ 0.26
ZFYVE28-206ENST00000508471 SOGA1O94964 1423 aa16.64■□□□□ 0.25
ZFYVE28-206ENST00000508471 ABCC8Q09428 1581 aa16.61■□□□□ 0.25
ZFYVE28-206ENST00000508471 CEP162Q5TB80 1403 aa16.6■□□□□ 0.25
ZFYVE28-206ENST00000508471 FAM50AQ14320 339 aaKnown RBP16.58■□□□□ 0.25
ZFYVE28-206ENST00000508471 HIRIP3Q9BW71 556 aaPredicted RBP16.57■□□□□ 0.24
ZFYVE28-206ENST00000508471 CCDC88BA6NC98 1476 aa16.55■□□□□ 0.24
ZFYVE28-206ENST00000508471 WIZO95785 1651 aa16.54■□□□□ 0.24
ZFYVE28-206ENST00000508471 UNC13AQ9UPW8 1703 aa16.5■□□□□ 0.23
ZFYVE28-206ENST00000508471 RUSC2Q8N2Y8 1516 aa16.48■□□□□ 0.23
ZFYVE28-206ENST00000508471 ARID3CA6NKF2 412 aa16.45■□□□□ 0.22
ZFYVE28-206ENST00000508471 POLR3GLQ9BT43 218 aa16.42■□□□□ 0.22
ZFYVE28-206ENST00000508471 CLIP1P30622 1438 aa16.39■□□□□ 0.21
ZFYVE28-206ENST00000508471 DDX10Q13206 875 aaKnown RBP16.38■□□□□ 0.21
ZFYVE28-206ENST00000508471 ANP32EQ9BTT0 268 aa16.38■□□□□ 0.21
ZFYVE28-206ENST00000508471 NEFLP07196 543 aa16.37■□□□□ 0.21
ZFYVE28-206ENST00000508471 BICRAQ9NZM4 1560 aa16.36■□□□□ 0.21
ZFYVE28-206ENST00000508471 TNIKQ9UKE5 1360 aa16.32■□□□□ 0.2
ZFYVE28-206ENST00000508471 BAZ1AQ9NRL2 1556 aaPredicted RBP16.32■□□□□ 0.2
ZFYVE28-206ENST00000508471 TRIM52Q96A61 297 aa16.32■□□□□ 0.2
ZFYVE28-206ENST00000508471 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.2
ZFYVE28-206ENST00000508471 KANK4Q5T7N3 995 aaPredicted RBP16.3■□□□□ 0.2
ZFYVE28-206ENST00000508471 SENP3-EIF4A1A0A087X0R7 540 aa16.27■□□□□ 0.2
ZFYVE28-206ENST00000508471 SMARCA4P51532 1647 aa16.27■□□□□ 0.19
ZFYVE28-206ENST00000508471 FKBP8Q14318 412 aa16.25■□□□□ 0.19
ZFYVE28-206ENST00000508471 GOLGA3Q08378 1498 aa16.25■□□□□ 0.19
ZFYVE28-206ENST00000508471 SIN3AQ96ST3 1273 aa16.24■□□□□ 0.19
ZFYVE28-206ENST00000508471 KCNH8Q96L42 1107 aa16.24■□□□□ 0.19
ZFYVE28-206ENST00000508471 IRX6P78412 446 aaPredicted RBP16.22■□□□□ 0.19
ZFYVE28-206ENST00000508471 PRKCSHP14314 528 aaPredicted RBP16.21■□□□□ 0.19
ZFYVE28-206ENST00000508471 ERICH6Q7L0X2 663 aa16.19■□□□□ 0.18
ZFYVE28-206ENST00000508471 CHIC2Q9UKJ5 165 aa16.15■□□□□ 0.18
ZFYVE28-206ENST00000508471 ZNF326Q5BKZ1 582 aaKnown RBP16.14■□□□□ 0.17
ZFYVE28-206ENST00000508471 TOP2AP11388 1531 aaKnown RBP16.11■□□□□ 0.17
ZFYVE28-206ENST00000508471 TSHZ2Q9NRE2 1034 aa16.11■□□□□ 0.17
ZFYVE28-206ENST00000508471 ANP32CO43423 234 aa16.1■□□□□ 0.17
ZFYVE28-206ENST00000508471 SUPT16HQ9Y5B9 1047 aaKnown RBP16.09■□□□□ 0.17
ZFYVE28-206ENST00000508471 RAPGEF2Q9Y4G8 1499 aa16.08■□□□□ 0.16
ZFYVE28-206ENST00000508471 SMARCA2P51531 1590 aa16.07■□□□□ 0.16
ZFYVE28-206ENST00000508471 CEP164Q9UPV0 1460 aa16.07■□□□□ 0.16
ZFYVE28-206ENST00000508471 EEA1Q15075 1411 aa16.03■□□□□ 0.16
ZFYVE28-206ENST00000508471 BAZ1BQ9UIG0 1483 aaKnown RBP16.02■□□□□ 0.16
ZFYVE28-206ENST00000508471 HNRNPUQ00839 825 aaKnown RBP eCLIP16.02■□□□□ 0.16
ZFYVE28-206ENST00000508471 ATAD2BQ9ULI0 1458 aa16.01■□□□□ 0.15
ZFYVE28-206ENST00000508471 VPS8Q8N3P4 1428 aa16.01■□□□□ 0.15
ZFYVE28-206ENST00000508471 RRP7BPQ9NSQ0 103 aa15.99■□□□□ 0.15
ZFYVE28-206ENST00000508471 FAM9BQ8IZU0 186 aa15.98■□□□□ 0.15
ZFYVE28-206ENST00000508471 DNAJC5BQ9UF47 199 aa15.94■□□□□ 0.14
ZFYVE28-206ENST00000508471 EIF4G1Q04637 1599 aaKnown RBP15.94■□□□□ 0.14
ZFYVE28-206ENST00000508471 TONSLQ96HA7 1378 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms