RNA–Protein interactions for RNA: ENST00000389672.9

EPHA6-201, Transcript of EPH receptor A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA6, Length 3,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA6-201ENST00000389672 NISCHQ9Y2I1 1504 aa21.19■□□□□ 0.98
EPHA6-201ENST00000389672 DCAF8L2P0C7V8 631 aa21.18■□□□□ 0.98
EPHA6-201ENST00000389672 SUPT5HO00267 1087 aaKnown RBP20.09■□□□□ 0.81
EPHA6-201ENST00000389672 SHROOM4Q9ULL8 1493 aa20.05■□□□□ 0.8
EPHA6-201ENST00000389672 EHMT2Q96KQ7 1210 aa19.36■□□□□ 0.69
EPHA6-201ENST00000389672 FAM9AQ8IZU1 332 aaPredicted RBP18.92■□□□□ 0.62
EPHA6-201ENST00000389672 CCDC180Q9P1Z9 1646 aa18.66■□□□□ 0.58
EPHA6-201ENST00000389672 TTBK1Q5TCY1 1321 aaPredicted RBP18.58■□□□□ 0.57
EPHA6-201ENST00000389672 ABCC9O60706 1549 aa18.51■□□□□ 0.55
EPHA6-201ENST00000389672 RANGAP1P46060 587 aaPredicted RBP18.48■□□□□ 0.55
EPHA6-201ENST00000389672 TRIM41Q8WV44 630 aa18.47■□□□□ 0.55
EPHA6-201ENST00000389672 PCGF6Q9BYE7 350 aa18.42■□□□□ 0.54
EPHA6-201ENST00000389672 APLP2Q06481 763 aa18.26■□□□□ 0.51
EPHA6-201ENST00000389672 PPARGC1BQ86YN6 1023 aaKnown RBP18.17■□□□□ 0.5
EPHA6-201ENST00000389672 UBTFP17480 764 aaKnown RBP18.14■□□□□ 0.49
EPHA6-201ENST00000389672 LOC105371045A0A1W2PR82 267 aa18.11■□□□□ 0.49
EPHA6-201ENST00000389672 PABPN1Q86U42 306 aaKnown RBP eCLIP18.1■□□□□ 0.49
EPHA6-201ENST00000389672 CHIC1Q5VXU3 224 aa18.07■□□□□ 0.48
EPHA6-201ENST00000389672 ATP1B4Q9UN42 357 aaPredicted RBP18.05■□□□□ 0.48
EPHA6-201ENST00000389672 CCER1Q8TC90 406 aaPredicted RBP17.82■□□□□ 0.44
EPHA6-201ENST00000389672 RB1CC1Q8TDY2 1594 aa17.67■□□□□ 0.42
EPHA6-201ENST00000389672 PELP1Q8IZL8 1130 aaKnown RBP17.65■□□□□ 0.42
EPHA6-201ENST00000389672 ZCCHC6Q5VYS8 1495 aaKnown RBP17.62■□□□□ 0.41
EPHA6-201ENST00000389672 NACADO15069 1562 aa17.62■□□□□ 0.41
EPHA6-201ENST00000389672 ITGAEP38570 1179 aa17.59■□□□□ 0.41
EPHA6-201ENST00000389672 TRIM26Q12899 539 aaPredicted RBP17.56■□□□□ 0.4
EPHA6-201ENST00000389672 HNRNPUL2Q1KMD3 747 aaKnown RBP17.49■□□□□ 0.39
EPHA6-201ENST00000389672 ZEB1P37275 1124 aaPredicted RBP17.44■□□□□ 0.38
EPHA6-201ENST00000389672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.43■□□□□ 0.38
EPHA6-201ENST00000389672 MYO15BQ96JP2 1530 aa17.4■□□□□ 0.38
EPHA6-201ENST00000389672 HRCP23327 699 aa17.39■□□□□ 0.38
EPHA6-201ENST00000389672 DCAF1Q9Y4B6 1507 aa17.39■□□□□ 0.37
EPHA6-201ENST00000389672 SCRIBQ14160 1630 aa17.37■□□□□ 0.37
EPHA6-201ENST00000389672 YTHDC1Q96MU7 727 aaKnown RBP17.3■□□□□ 0.36
EPHA6-201ENST00000389672 P3H3Q8IVL6 736 aa17.14■□□□□ 0.33
EPHA6-201ENST00000389672 MYT1LQ9UL68 1186 aa17.13■□□□□ 0.33
EPHA6-201ENST00000389672 FBLN2P98095 1184 aa17.13■□□□□ 0.33
EPHA6-201ENST00000389672 CSRNP3Q8WYN3 585 aa17.13■□□□□ 0.33
EPHA6-201ENST00000389672 CENPBP07199 599 aaPredicted RBP17.11■□□□□ 0.33
EPHA6-201ENST00000389672 UNC13AQ9UPW8 1703 aa17.1■□□□□ 0.33
EPHA6-201ENST00000389672 CNGB1Q14028 1251 aaPredicted RBP17.09■□□□□ 0.33
EPHA6-201ENST00000389672 FAM50AQ14320 339 aaKnown RBP17.08■□□□□ 0.33
EPHA6-201ENST00000389672 MYT1Q01538 1121 aa17.08■□□□□ 0.32
EPHA6-201ENST00000389672 ARID3CA6NKF2 412 aa17.07■□□□□ 0.32
EPHA6-201ENST00000389672 POLR3GLQ9BT43 218 aa17.04■□□□□ 0.32
EPHA6-201ENST00000389672 BICRAQ9NZM4 1560 aa17.01■□□□□ 0.31
EPHA6-201ENST00000389672 SCAF1Q9H7N4 1312 aaKnown RBP16.98■□□□□ 0.31
EPHA6-201ENST00000389672 RSF1Q96T23 1441 aaPredicted RBP16.94■□□□□ 0.3
EPHA6-201ENST00000389672 NEUROD1Q13562 356 aa16.9■□□□□ 0.3
EPHA6-201ENST00000389672 TRIM52Q96A61 297 aa16.85■□□□□ 0.29
EPHA6-201ENST00000389672 DNAJC5BQ9UF47 199 aa16.84■□□□□ 0.29
EPHA6-201ENST00000389672 CECR2Q9BXF3 1484 aa16.81■□□□□ 0.28
EPHA6-201ENST00000389672 DIEXFQ68CQ4 756 aaKnown RBP16.79■□□□□ 0.28
EPHA6-201ENST00000389672 NEFLP07196 543 aa16.7■□□□□ 0.26
EPHA6-201ENST00000389672 ZNF326Q5BKZ1 582 aaKnown RBP16.7■□□□□ 0.26
EPHA6-201ENST00000389672 ZNF777Q9ULD5 760 aaPredicted RBP16.68■□□□□ 0.26
EPHA6-201ENST00000389672 EIF4G1Q04637 1599 aaKnown RBP16.65■□□□□ 0.26
EPHA6-201ENST00000389672 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
EPHA6-201ENST00000389672 CC2D2AQ9P2K1 1620 aa16.58■□□□□ 0.25
EPHA6-201ENST00000389672 CHIC2Q9UKJ5 165 aa16.53■□□□□ 0.24
EPHA6-201ENST00000389672 BAZ1BQ9UIG0 1483 aaKnown RBP16.52■□□□□ 0.24
EPHA6-201ENST00000389672 WRNQ14191 1432 aaPredicted RBP eCLIP16.5■□□□□ 0.23
EPHA6-201ENST00000389672 MROH2BQ7Z745 1585 aa16.49■□□□□ 0.23
EPHA6-201ENST00000389672 ZNF316A6NFI3 1004 aaPredicted RBP16.48■□□□□ 0.23
EPHA6-201ENST00000389672 CLIP1P30622 1438 aa16.46■□□□□ 0.23
EPHA6-201ENST00000389672 CHMP7Q8WUX9 453 aaPredicted RBP16.44■□□□□ 0.22
EPHA6-201ENST00000389672 BAZ1AQ9NRL2 1556 aaPredicted RBP16.44■□□□□ 0.22
EPHA6-201ENST00000389672 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
EPHA6-201ENST00000389672 CDK11AQ9UQ88 783 aaPredicted RBP16.43■□□□□ 0.22
EPHA6-201ENST00000389672 SMARCA4P51532 1647 aa16.4■□□□□ 0.22
EPHA6-201ENST00000389672 CEP162Q5TB80 1403 aa16.39■□□□□ 0.21
EPHA6-201ENST00000389672 SOGA1O94964 1423 aa16.39■□□□□ 0.21
EPHA6-201ENST00000389672 BCANQ96GW7 911 aa16.34■□□□□ 0.21
EPHA6-201ENST00000389672 HIRIP3Q9BW71 556 aaPredicted RBP16.34■□□□□ 0.21
EPHA6-201ENST00000389672 ATAD2BQ9ULI0 1458 aa16.34■□□□□ 0.21
EPHA6-201ENST00000389672 SMARCA2P51531 1590 aa16.32■□□□□ 0.2
EPHA6-201ENST00000389672 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
EPHA6-201ENST00000389672 MTUS2Q5JR59 1369 aa16.32■□□□□ 0.2
EPHA6-201ENST00000389672 ANP32CO43423 234 aa16.31■□□□□ 0.2
EPHA6-201ENST00000389672 CCDC88BA6NC98 1476 aa16.31■□□□□ 0.2
EPHA6-201ENST00000389672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.3■□□□□ 0.2
EPHA6-201ENST00000389672 RRP7BPQ9NSQ0 103 aa16.29■□□□□ 0.2
EPHA6-201ENST00000389672 ABCC8Q09428 1581 aa16.28■□□□□ 0.2
EPHA6-201ENST00000389672 GOLGA3Q08378 1498 aa16.28■□□□□ 0.2
EPHA6-201ENST00000389672 DDX10Q13206 875 aaKnown RBP16.27■□□□□ 0.2
EPHA6-201ENST00000389672 NCAPD3P42695 1498 aa16.27■□□□□ 0.2
EPHA6-201ENST00000389672 KCNH8Q96L42 1107 aa16.27■□□□□ 0.19
EPHA6-201ENST00000389672 BCL11AQ9H165 835 aa16.26■□□□□ 0.19
EPHA6-201ENST00000389672 KIF27Q86VH2 1401 aa16.26■□□□□ 0.19
EPHA6-201ENST00000389672 ACIN1Q9UKV3 1341 aaKnown RBP16.25■□□□□ 0.19
EPHA6-201ENST00000389672 PLPPR3Q6T4P5 718 aa16.24■□□□□ 0.19
EPHA6-201ENST00000389672 CHGAP10645 457 aaKnown RBP16.23■□□□□ 0.19
EPHA6-201ENST00000389672 EEA1Q15075 1411 aa16.23■□□□□ 0.19
EPHA6-201ENST00000389672 TNIKQ9UKE5 1360 aa16.23■□□□□ 0.19
EPHA6-201ENST00000389672 TONSLQ96HA7 1378 aa16.22■□□□□ 0.19
EPHA6-201ENST00000389672 WIZO95785 1651 aa16.21■□□□□ 0.19
EPHA6-201ENST00000389672 NPM1P06748 294 aaKnown RBP eCLIP16.2■□□□□ 0.18
EPHA6-201ENST00000389672 SENP3Q9H4L4 574 aaPredicted RBP16.2■□□□□ 0.18
EPHA6-201ENST00000389672 KDM2AQ9Y2K7 1162 aa16.19■□□□□ 0.18
EPHA6-201ENST00000389672 TSPY4P0CV99 314 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms