Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 AL359183.1-201ENST00000623796 2132 ntBASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 ZNF890P-202ENST00000530367 1156 ntBASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 AC190387.1-201ENST00000551683 408 ntBASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 AC074044.1-201ENST00000609673 707 ntBASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.65□□□□□ -0.06
SIMC1Q8NDZ2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
SIMC1Q8NDZ2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 TMBIM7P-203ENST00000641617 1718 ntBASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 BASP1P1-201ENST00000430708 665 ntBASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 AC114501.2-201ENST00000439631 535 ntBASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 SLED1-202ENST00000512051 380 ntBASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms