Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC027237.1-201ENST00000560942 655 ntBASIC20.87■□□□□ 0.93
XRN1Q8IZH2 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 AC103810.10-201ENST00000606504 343 ntBASIC20.87■□□□□ 0.93
XRN1Q8IZH2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 CHCHD2P9-201ENST00000461726 456 ntBASIC20.86■□□□□ 0.93
XRN1Q8IZH2 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 RN7SL81P-201ENST00000493781 261 ntBASIC20.86■□□□□ 0.93
XRN1Q8IZH2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 MIR3188-201ENST00000583494 85 ntBASIC20.86■□□□□ 0.93
XRN1Q8IZH2 AC009884.2-201ENST00000603110 324 ntBASIC20.86■□□□□ 0.93
XRN1Q8IZH2 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
XRN1Q8IZH2 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 AL357563.1-201ENST00000404728 395 ntBASIC20.85■□□□□ 0.93
XRN1Q8IZH2 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 XBP1P1-201ENST00000436573 652 ntBASIC20.85■□□□□ 0.93
XRN1Q8IZH2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 FTH1P22-201ENST00000456305 520 ntBASIC20.85■□□□□ 0.93
XRN1Q8IZH2 PFN2-206ENST00000461930 606 ntTSL 4 BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 AC106820.2-201ENST00000563775 3264 ntBASIC20.85■□□□□ 0.93
XRN1Q8IZH2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
XRN1Q8IZH2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 DUTP3-201ENST00000450025 415 ntBASIC20.84■□□□□ 0.93
XRN1Q8IZH2 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 AC005041.3-201ENST00000606287 649 ntBASIC20.84■□□□□ 0.93
XRN1Q8IZH2 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 AC144522.1-201ENST00000625111 1658 ntBASIC20.84■□□□□ 0.93
XRN1Q8IZH2 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 AL139008.1-201ENST00000437894 228 ntBASIC20.84■□□□□ 0.93
XRN1Q8IZH2 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
XRN1Q8IZH2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
XRN1Q8IZH2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
XRN1Q8IZH2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
XRN1Q8IZH2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
XRN1Q8IZH2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
XRN1Q8IZH2 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
XRN1Q8IZH2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.83■□□□□ 0.93
XRN1Q8IZH2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.83■□□□□ 0.93
XRN1Q8IZH2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
XRN1Q8IZH2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
XRN1Q8IZH2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
XRN1Q8IZH2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
XRN1Q8IZH2 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
XRN1Q8IZH2 AC012362.1-201ENST00000434906 739 ntBASIC20.83■□□□□ 0.92
XRN1Q8IZH2 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
XRN1Q8IZH2 AC008723.1-201ENST00000506922 207 ntBASIC20.83■□□□□ 0.92
XRN1Q8IZH2 POLD4-208ENST00000532830 904 ntTSL 3 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms