Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LYSMD2Q8IV50 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
LYSMD2Q8IV50 AL118506.1-201ENST00000601296 3082 ntBASIC13.65□□□□□ -0.23
LYSMD2Q8IV50 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
LYSMD2Q8IV50 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 PCED1CP-201ENST00000419887 785 ntBASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 AL365330.1-201ENST00000607459 531 ntBASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 BEND3P3-201ENST00000611030 2440 ntBASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 AC012569.1-201ENST00000591191 1524 ntBASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
LYSMD2Q8IV50 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 AC004241.5-201ENST00000623870 2448 ntBASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms