Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATG4DQ86TL0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 AP000845.1-201ENST00000581677 2131 ntBASIC14.03□□□□□ -0.16
ATG4DQ86TL0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 GNAQP1-201ENST00000444815 1067 ntBASIC14.03□□□□□ -0.16
ATG4DQ86TL0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 AP005018.1-201ENST00000525475 301 ntBASIC14.03□□□□□ -0.16
ATG4DQ86TL0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 AC190387.1-201ENST00000551683 408 ntBASIC14.03□□□□□ -0.16
ATG4DQ86TL0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.03□□□□□ -0.16
ATG4DQ86TL0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATG4DQ86TL0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
ATG4DQ86TL0 CLK3P2-201ENST00000427566 1453 ntBASIC14.02□□□□□ -0.16
ATG4DQ86TL0 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.02□□□□□ -0.16
ATG4DQ86TL0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 CRB3P1-201ENST00000449338 276 ntBASIC14.02□□□□□ -0.17
ATG4DQ86TL0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 AC104794.3-201ENST00000566840 1248 ntBASIC14.02□□□□□ -0.17
ATG4DQ86TL0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 AC068587.6-202ENST00000641839 5619 ntBASIC14.02□□□□□ -0.17
ATG4DQ86TL0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ATG4DQ86TL0 REXO1L4P-201ENST00000605109 1937 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms