Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 VN2R19P-201ENST00000442399 1052 ntBASIC12.39□□□□□ -0.43
FAM78BQ5VT40 AC009947.1-201ENST00000444350 727 ntBASIC12.39□□□□□ -0.43
FAM78BQ5VT40 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 AC079776.4-201ENST00000511039 504 ntBASIC12.39□□□□□ -0.43
FAM78BQ5VT40 RNA5SP419-201ENST00000515908 135 ntBASIC12.39□□□□□ -0.43
FAM78BQ5VT40 RNA5SP415-201ENST00000517246 115 ntBASIC12.39□□□□□ -0.43
FAM78BQ5VT40 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 AC109635.5-201ENST00000533593 962 ntBASIC12.39□□□□□ -0.43
FAM78BQ5VT40 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 AC243562.2-201ENST00000561247 970 ntBASIC12.39□□□□□ -0.43
FAM78BQ5VT40 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 AL009183.1-201ENST00000603760 355 ntBASIC12.39□□□□□ -0.43
FAM78BQ5VT40 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 AJ011931.1-201ENST00000618749 2492 ntBASIC12.39□□□□□ -0.43
FAM78BQ5VT40 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
FAM78BQ5VT40 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 AL359183.1-201ENST00000623796 2132 ntBASIC12.38□□□□□ -0.43
FAM78BQ5VT40 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.38□□□□□ -0.43
FAM78BQ5VT40 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 AL645939.2-201ENST00000427340 991 ntBASIC12.38□□□□□ -0.43
FAM78BQ5VT40 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.38□□□□□ -0.43
FAM78BQ5VT40 IGHV3-22-201ENST00000520721 359 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms