Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 AC084364.1-201ENST00000551967 1556 ntBASIC17.33■□□□□ 0.37
HERC4Q5GLZ8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HERC4Q5GLZ8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HERC4Q5GLZ8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HERC4Q5GLZ8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 AC004840.1-201ENST00000636359 365 ntBASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERC4Q5GLZ8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 AC015910.1-201ENST00000579400 975 ntBASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 AC006486.2-201ENST00000624246 2199 ntBASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HERC4Q5GLZ8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 FAM86MP-201ENST00000340703 885 ntBASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 AL133267.1-201ENST00000398220 340 ntBASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
HERC4Q5GLZ8 AC092337.1-201ENST00000568699 1129 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms