Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN20Q4JDL3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN20Q4JDL3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN20Q4JDL3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN20Q4JDL3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PTPN20Q4JDL3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN20Q4JDL3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN20Q4JDL3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN20Q4JDL3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN20Q4JDL3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 REXO1L2P-201ENST00000425429 2069 ntBASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 ZBED1P1-201ENST00000502364 1930 ntBASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 AC123567.1-201ENST00000548294 1261 ntBASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 SAMD11P1-201ENST00000571429 661 ntBASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 WASH3P-207ENST00000560956 1394 ntBASIC16.26■□□□□ 0.19
PTPN20Q4JDL3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN20Q4JDL3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms