Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC20.39■□□□□ 0.85
ZC3H6P61129 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.39■□□□□ 0.85
ZC3H6P61129 LINC02447-202ENST00000501888 2146 ntBASIC20.39■□□□□ 0.85
ZC3H6P61129 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
ZC3H6P61129 INE2-201ENST00000630399 1874 ntBASIC20.39■□□□□ 0.85
ZC3H6P61129 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
ZC3H6P61129 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3H6P61129 AC127383.1-201ENST00000444697 1800 ntBASIC20.39■□□□□ 0.85
ZC3H6P61129 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
ZC3H6P61129 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H6P61129 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
ZC3H6P61129 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H6P61129 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.38■□□□□ 0.85
ZC3H6P61129 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H6P61129 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ZC3H6P61129 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC20.38■□□□□ 0.85
ZC3H6P61129 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H6P61129 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC20.38■□□□□ 0.85
ZC3H6P61129 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H6P61129 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ZC3H6P61129 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.38■□□□□ 0.85
ZC3H6P61129 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H6P61129 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ZC3H6P61129 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H6P61129 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H6P61129 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H6P61129 AC006335.1-201ENST00000445200 547 ntBASIC20.38■□□□□ 0.85
ZC3H6P61129 RPL18P13-201ENST00000478088 569 ntBASIC20.38■□□□□ 0.85
ZC3H6P61129 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC20.38■□□□□ 0.85
ZC3H6P61129 WDR7-208ENST00000589935 544 ntTSL 4 BASIC20.38■□□□□ 0.85
ZC3H6P61129 AC009955.4-201ENST00000597192 544 ntBASIC20.38■□□□□ 0.85
ZC3H6P61129 AL603764.1-201ENST00000636452 321 ntBASIC20.38■□□□□ 0.85
ZC3H6P61129 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H6P61129 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ZC3H6P61129 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H6P61129 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.38■□□□□ 0.85
ZC3H6P61129 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H6P61129 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.38■□□□□ 0.85
ZC3H6P61129 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ZC3H6P61129 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC20.38■□□□□ 0.85
ZC3H6P61129 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H6P61129 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
ZC3H6P61129 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.37■□□□□ 0.85
ZC3H6P61129 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.37■□□□□ 0.85
ZC3H6P61129 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H6P61129 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
ZC3H6P61129 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H6P61129 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H6P61129 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H6P61129 PCDHA12-202ENST00000613593 2588 ntBASIC20.37■□□□□ 0.85
ZC3H6P61129 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ZC3H6P61129 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC20.37■□□□□ 0.85
ZC3H6P61129 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ZC3H6P61129 HNRNPA1P41-201ENST00000397777 928 ntBASIC20.37■□□□□ 0.85
ZC3H6P61129 ISCA2P1-201ENST00000425548 448 ntBASIC20.37■□□□□ 0.85
ZC3H6P61129 PUDPP3-201ENST00000445368 636 ntBASIC20.37■□□□□ 0.85
ZC3H6P61129 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
ZC3H6P61129 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC20.37■□□□□ 0.85
ZC3H6P61129 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H6P61129 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC20.37■□□□□ 0.85
ZC3H6P61129 AC009093.2-202ENST00000620513 2079 ntBASIC20.37■□□□□ 0.85
ZC3H6P61129 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC20.37■□□□□ 0.85
ZC3H6P61129 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC20.37■□□□□ 0.85
ZC3H6P61129 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H6P61129 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ZC3H6P61129 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H6P61129 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H6P61129 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC20.37■□□□□ 0.85
ZC3H6P61129 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
ZC3H6P61129 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ZC3H6P61129 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H6P61129 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H6P61129 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H6P61129 E2F3P2-201ENST00000447755 1422 ntBASIC20.36■□□□□ 0.85
ZC3H6P61129 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H6P61129 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H6P61129 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H6P61129 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H6P61129 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H6P61129 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC20.36■□□□□ 0.85
ZC3H6P61129 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H6P61129 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H6P61129 AL157414.3-201ENST00000624276 1954 ntBASIC20.36■□□□□ 0.85
ZC3H6P61129 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H6P61129 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.36■□□□□ 0.85
ZC3H6P61129 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H6P61129 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H6P61129 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H6P61129 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H6P61129 AL355334.1-201ENST00000417713 215 ntBASIC20.36■□□□□ 0.85
ZC3H6P61129 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC20.36■□□□□ 0.85
ZC3H6P61129 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H6P61129 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H6P61129 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
ZC3H6P61129 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC20.36■□□□□ 0.85
ZC3H6P61129 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H6P61129 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC20.36■□□□□ 0.85
ZC3H6P61129 SNORD3B-2-202ENST00000571722 791 ntBASIC20.36■□□□□ 0.85
ZC3H6P61129 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC20.36■□□□□ 0.85
ZC3H6P61129 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms